WormBase Tree Display for Gene: WBGene00000977
expand all nodes | collapse all nodes | view schema
| WBGene00000977 | SMap | S_parent | Sequence | R05D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dhs-14 | Person_evidence | WBPerson651 | |||||
| Sequence_name | R05D8.8 | ||||||||
| Molecular_name | R05D8.8 | ||||||||
| R05D8.8.1 | |||||||||
| CE23899 | |||||||||
| Other_name | CELE_R05D8.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | dhs-14 | ||||||||
| DB_info | Database | AceView | gene | 5D242 | |||||
| WormQTL | gene | WBGene00000977 | |||||||
| WormFlux | gene | WBGene00000977 | |||||||
| NDB | locus_tag | CELE_R05D8.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000977|UniProtKB=Q9N5G3 | |||||||
| family | PTHR44115 | ||||||||
| NCBI | gene | 178738 | |||||||
| RefSeq | protein | NM_071351.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315651 | |||||||
| TrEMBL | UniProtAcc | Q9N5G3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5G3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095400 | ||||||||
| Ortholog (69) | |||||||||
| Paralog (40) | |||||||||
| Structured_description | Concise_description | dhs-14 encodes a short chain-type of alcohol/other dehydrogenase, more similar to 18 paralogs in C. elegans than to any non-worm protein; it is dispensable for viability and gross morphology in mass RNAi screens. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity. Is an ortholog of human HSD17B14 (hydroxysteroid 17-beta dehydrogenase 14). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R05D8.8 | |||||||
| Corresponding_transcript | R05D8.8.1 | ||||||||
| Other_sequence | JO475226.1 | ||||||||
| Name_isotig04741 | |||||||||
| CJC01417_1 | |||||||||
| Acan_isotig01735 | |||||||||
| ASC05332_1 | |||||||||
| JI169090.1 | |||||||||
| FK802722.1 | |||||||||
| CBC13117_1 | |||||||||
| Oden_isotig26581 | |||||||||
| FK801950.1 | |||||||||
| FG973969.1 | |||||||||
| AS00987 | |||||||||
| FK801381.1 | |||||||||
| TX01839 | |||||||||
| AS01025 | |||||||||
| FF679291.1 | |||||||||
| FK809506.1 | |||||||||
| PPC18688_1 | |||||||||
| AS02120 | |||||||||
| TCC02212_1 | |||||||||
| ASC02418_1 | |||||||||
| FK806601.1 | |||||||||
| JI174352.1 | |||||||||
| EX549173.1 | |||||||||
| AS12497 | |||||||||
| EY469090.1 | |||||||||
| FK800202.1 | |||||||||
| FC542514.1 | |||||||||
| FK808573.1 | |||||||||
| HO243923.1 | |||||||||
| EY459117.1 | |||||||||
| JI168598.1 | |||||||||
| FK809465.1 | |||||||||
| FK804518.1 | |||||||||
| PPC02819_1 | |||||||||
| AS01715 | |||||||||
| FF678922.1 | |||||||||
| ACC01392_1 | |||||||||
| Associated_feature | WBsf652517 | ||||||||
| WBsf668802 | |||||||||
| WBsf233436 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00034614 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051307 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017438 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007247 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019610 | ||||||||
| Expr1155000 | |||||||||
| Expr2010897 | |||||||||
| Expr2029136 | |||||||||
| Drives_construct | WBCnstr00037165 | ||||||||
| Construct_product | WBCnstr00037165 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (222) | |||||||||
| Interaction (36) | |||||||||
| Map_info | Map | V | Position | -13.1535 | Error | 0.004136 | |||
| Positive | Positive_clone | R05D8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
