WormBase Tree Display for Gene: WBGene00000967
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| WBGene00000967 | SMap | S_parent | Sequence | T02E1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dhs-3 | Person_evidence | WBPerson651 | |||||
| Sequence_name | T02E1.5 | ||||||||
| Molecular_name | T02E1.5a | ||||||||
| T02E1.5a.1 | |||||||||
| CE41004 | |||||||||
| T02E1.5b | |||||||||
| CE41005 | |||||||||
| T02E1.5c | |||||||||
| CE41006 | |||||||||
| T02E1.5b.1 | |||||||||
| T02E1.5c.1 | |||||||||
| Other_name | CELE_T02E1.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | dhs-3 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00000967 | |||||
| WormFlux | gene | WBGene00000967 | |||||||
| NDB | locus_tag | CELE_T02E1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000967|UniProtKB=A5JYX5 | |||||||
| family | PTHR24322 | ||||||||
| NCBI | gene | 172603 | |||||||
| RefSeq | protein | NM_001129038.4 | |||||||
| NM_001129037.4 | |||||||||
| NM_001129036.4 | |||||||||
| SwissProt | UniProtAcc | A5JYX5 | |||||||
| UniProt_GCRP | UniProtAcc | A5JYX5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 27 Apr 2007 10:07:20 | WBPerson1983 | Event | Acquires_merge | WBGene00011377 | ||||
| Acquires_merge | WBGene00011377 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele | WBVar02127986 | ||||||||
| WBVar02127987 | |||||||||
| WBVar02127988 | |||||||||
| WBVar01499175 | |||||||||
| WBVar01499176 | |||||||||
| WBVar01574020 | |||||||||
| WBVar02150720 | |||||||||
| WBVar01500105 | |||||||||
| WBVar01499739 | |||||||||
| WBVar00653990 | |||||||||
| WBVar00653991 | |||||||||
| WBVar00653992 | |||||||||
| WBVar00653993 | |||||||||
| WBVar00653994 | |||||||||
| WBVar00653995 | |||||||||
| WBVar00653996 | |||||||||
| WBVar00653997 | |||||||||
| WBVar00653998 | |||||||||
| WBVar00653999 | |||||||||
| WBVar00654000 | |||||||||
| WBVar01957333 | |||||||||
| WBVar00654001 | |||||||||
| WBVar01914697 | |||||||||
| WBVar00654002 | |||||||||
| WBVar00654003 | |||||||||
| WBVar00654004 | |||||||||
| WBVar00654005 | |||||||||
| WBVar00654006 | |||||||||
| WBVar00299392 | |||||||||
| WBVar00654007 | |||||||||
| WBVar00654008 | |||||||||
| WBVar00654009 | |||||||||
| WBVar00654010 | |||||||||
| WBVar00654011 | |||||||||
| WBVar00654012 | |||||||||
| WBVar00654013 | |||||||||
| WBVar00654014 | |||||||||
| WBVar01420789 | |||||||||
| WBVar00654015 | |||||||||
| WBVar00654016 | |||||||||
| WBVar00654017 | |||||||||
| WBVar00654018 | |||||||||
| WBVar01420800 | |||||||||
| WBVar00654019 | |||||||||
| WBVar00654020 | |||||||||
| WBVar01911835 | |||||||||
| WBVar00654021 | |||||||||
| WBVar00654022 | |||||||||
| WBVar00654023 | |||||||||
| WBVar00654024 | |||||||||
| WBVar00654025 | |||||||||
| WBVar00654026 | |||||||||
| WBVar00654027 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499054 | |||||||||
| WBVar00277162 | |||||||||
| WBVar00339714 | |||||||||
| WBVar00339715 | |||||||||
| WBVar00339716 | |||||||||
| WBVar00339717 | |||||||||
| WBVar00339718 | |||||||||
| WBVar00339719 | |||||||||
| WBVar00339720 | |||||||||
| WBVar00339721 | |||||||||
| WBVar00339722 | |||||||||
| WBVar00339723 | |||||||||
| WBVar00339724 | |||||||||
| WBVar00339725 | |||||||||
| WBVar00339726 | |||||||||
| WBVar00154978 | |||||||||
| WBVar00093788 | |||||||||
| WBVar00154979 | |||||||||
| WBVar00154980 | |||||||||
| WBVar01474051 | |||||||||
| WBVar00094630 | |||||||||
| WBVar00094631 | |||||||||
| WBVar01498959 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004817 | ||||||||
| 00004818 | |||||||||
| 00004819 | |||||||||
| 00004820 | |||||||||
| 00004821 | |||||||||
| 00004822 | |||||||||
| 00004823 | |||||||||
| 00004824 | |||||||||
| 00004825 | |||||||||
| 00004826 | |||||||||
| Ortholog (45) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Concise_description | dhs-3 encodes a member of the short-chain dehydrogenases/reductases family (SDR) predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Involved in response to oxidative stress. Located in lipid droplet. Expressed in intestinal cell. Is an ortholog of human SDR16C5 (short chain dehydrogenase/reductase family 16C member 5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T02E1.5a | |||||||
| T02E1.5b | |||||||||
| T02E1.5c | |||||||||
| Corresponding_CDS_history | T02E1.5:wp175 | ||||||||
| Corresponding_transcript | T02E1.5a.1 | ||||||||
| T02E1.5b.1 | |||||||||
| T02E1.5c.1 | |||||||||
| Other_sequence (79) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035060 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004105 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052211 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116815 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052212 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035059 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12410 | ||||||||
| Expr14388 | |||||||||
| Expr16186 | |||||||||
| Expr16187 | |||||||||
| Expr1018894 | |||||||||
| Expr1030602 | |||||||||
| Expr1155843 | |||||||||
| Expr2010917 | |||||||||
| Expr2029156 | |||||||||
| Drives_construct | WBCnstr00021891 | ||||||||
| WBCnstr00023090 | |||||||||
| WBCnstr00037172 | |||||||||
| Construct_product | WBCnstr00020984 | ||||||||
| WBCnstr00021891 | |||||||||
| WBCnstr00022296 | |||||||||
| WBCnstr00023090 | |||||||||
| WBCnstr00037172 | |||||||||
| Antibody | WBAntibody00002328 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (243) | |||||||||
| Interaction (120) | |||||||||
| Map_info | Map | I | Position | 2.659 | Error | 0.008209 | |||
| Positive | Positive_clone | T02E1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (22) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
