WormBase Tree Display for Gene: WBGene00000870

WBGene00000870 SMap: S_parent: Sequence: Y38F1A
  Identity: Version: 1
    Name: CGC_name: cyd-1 Person_evidence: WBPerson346
      Sequence_name: Y38F1A.5
      Molecular_name: Y38F1A.5
        Y38F1A.5.1
        CE21610
        Y38F1A.5.2
      Other_name: CELE_Y38F1A.5 Accession_evidence: NDB BX284602
      Public_name: cyd-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cyd
    Allele (333)
    Legacy_information: [Krause MW] cyd-1 is related to the G1 cyclin, Cyclin D.
    Strain: WBStrain00030564
      WBStrain00034602
      WBStrain00034604
      WBStrain00035845
      WBStrain00047322
      WBStrain00054804
    RNASeq_FPKM (74)
    GO_annotation (31)
    Ortholog (47)
    Paralog (13)
    Structured_description: Concise_description: cyd-1 encodes a cyclin D homolog that is required for escape from G1 cycle arrest in postembryonic blast cells, affects movement and larval viability, and may physically interact with CDK-46 and CKI-1; expressed embryonically primarily in the head, ventral cord, tail, and is later expressed primarily in the seam cells and in the somatic gonad. Paper_evidence: WBPaper00003752
            WBPaper00004996
          Curator_confirmed: WBPerson48
          Date_last_updated: 09 Aug 2004 00:00:00
      Automated_description: Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Involved in several processes, including regulation of cell cycle process; regulation of cell division; and reproductive process. Acts upstream of or within nematode male tail tip morphogenesis. Predicted to be located in cytoplasm and nucleus. Predicted to be part of cyclin-dependent protein kinase holoenzyme complex. Expressed in gonad; hypodermis; intestine; neurons; and vulva. Human ortholog(s) of this gene implicated in several diseases, including breast carcinoma (multiple); carcinoma (multiple); and hematologic cancer (multiple). Is an ortholog of human CCND3 (cyclin D3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (49)
  Molecular_info: Corresponding_CDS: Y38F1A.5
    Corresponding_transcript: Y38F1A.5.1
      Y38F1A.5.2
    Other_sequence: Oden_isotig22946
      Dviv_isotig27397
      CJC13402_1
      CRC09536_1
      JI482584.1
      CR07700
      FD516691.1
      CSC00981_1
    Associated_feature (29)
  Experimental_info: RNAi_result (23)
    Expr_pattern: Expr1155
      Expr12577
      Expr1022984
      Expr1030537
      Expr1159559
      Expr2010653
      Expr2028893
    Drives_construct: WBCnstr00010111
      WBCnstr00021179
      WBCnstr00037234
    Construct_product: WBCnstr00010111
      WBCnstr00037234
    Regulate_expr_cluster: WBPaper00040426:CYD-1_CDK-4_downregulated
      WBPaper00040426:CYD-1_CDK-4_upregulated
    Microarray_results (26)
    Expression_cluster (186)
    Interaction: WBInteraction000000956
      WBInteraction000001486
      WBInteraction000004558
      WBInteraction000004670
      WBInteraction000004817
      WBInteraction000004841
      WBInteraction000005359
      WBInteraction000005531
      WBInteraction000008800
      WBInteraction000008801
      WBInteraction000008802
      WBInteraction000008803
      WBInteraction000008994
      WBInteraction000028326
      WBInteraction000028631
      WBInteraction000029837
      WBInteraction000030210
      WBInteraction000032969
      WBInteraction000033214
      WBInteraction000033279
      WBInteraction000033533
      WBInteraction000033712
      WBInteraction000033926
      WBInteraction000034524
      WBInteraction000034542
      WBInteraction000034543
      WBInteraction000035726
      WBInteraction000038736
      WBInteraction000040315
      WBInteraction000041728
      WBInteraction000044329
      WBInteraction000050757
      WBInteraction000052039
      WBInteraction000052040
      WBInteraction000052041
      WBInteraction000052042
      WBInteraction000052043
      WBInteraction000107430
      WBInteraction000116203
      WBInteraction000117952
      WBInteraction000118226
      WBInteraction000118259
      WBInteraction000118260
      WBInteraction000119384
      WBInteraction000120031
      WBInteraction000122567
      WBInteraction000122600
      WBInteraction000122634
      WBInteraction000122789
      WBInteraction000126068
      WBInteraction000126816
      WBInteraction000136070
      WBInteraction000140866
      WBInteraction000157916
      WBInteraction000159753
      WBInteraction000161301
      WBInteraction000161493
      WBInteraction000161531
      WBInteraction000161805
      WBInteraction000161866
      WBInteraction000162264
      WBInteraction000162273
      WBInteraction000162277
      WBInteraction000162278
      WBInteraction000162279
      WBInteraction000162491
      WBInteraction000165578
      WBInteraction000167021
      WBInteraction000167079
      WBInteraction000169120
      WBInteraction000169256
      WBInteraction000173018
      WBInteraction000173198
      WBInteraction000182867
      WBInteraction000226242
      WBInteraction000264847
      WBInteraction000282935
      WBInteraction000339565
      WBInteraction000339567
      WBInteraction000363491
      WBInteraction000366440
      WBInteraction000388287
      WBInteraction000502228
      WBInteraction000502229
      WBInteraction000502230
      WBInteraction000519091
      WBInteraction000519093
      WBInteraction000538726
      WBInteraction000538727
      WBInteraction000538728
      WBInteraction000538730
      WBInteraction000538732
      WBInteraction000542707
      WBInteraction000544780
      WBInteraction000548591
      WBInteraction000549803
      WBInteraction000555942
      WBInteraction000555943
      WBInteraction000557094
      WBInteraction000557640
    Anatomy_function: WBbtf0481
  Map_info: Map: II Position: 13.2907 Error: 0.135916
    Positive: Positive_clone: Y38F1A Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4247
        4770
    Pseudo_map_position
  Reference (38)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene