WormBase Tree Display for Gene: WBGene00000854
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| WBGene00000854 | Evidence | Accession_evidence | EMBL | AF400666 | |||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C07H6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | cux-7 | Person_evidence | WBPerson247 | |||||
| Sequence_name | C07H6.8 | ||||||||
| Molecular_name | C07H6.8 | ||||||||
| C07H6.8.1 | |||||||||
| CE30241 | |||||||||
| C07H6.8.2 | |||||||||
| C07H6.8.3 | |||||||||
| Other_name | CELE_C07H6.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cux-7 | ||||||||
| DB_info | Database | AceView | gene | 3I606 | |||||
| WormQTL | gene | WBGene00000854 | |||||||
| WormFlux | gene | WBGene00000854 | |||||||
| NDB | locus_tag | CELE_C07H6.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000854|UniProtKB=Q95YE8 | |||||||
| family | PTHR12484 | ||||||||
| NCBI | gene | 176066 | |||||||
| RefSeq | protein | NM_066250.9 | |||||||
| TREEFAM | TREEFAM_ID | TF320443 | |||||||
| TrEMBL | UniProtAcc | Q95YE8 | |||||||
| UniProt_GCRP | UniProtAcc | Q95YE8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cux | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP3444 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Concise_description | cux-7 encodes an conserved but unfamiliar protein orthologous to the human gene XE7 and the Drosophila gene CG2179-PA; since cux-7 is in an operon with clk-2, CUX-7 might have some role in telomere maintenance, development or rhythmic behavior; however, cux-7 currently has no known function, and is dispensable for viability and gross morphology in mass RNAi screens. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00004941 | |||||||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in OLL; body wall muscle cell; germ line; and interneuron based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on RNA-seq and microarray studies. Is affected by five chemicals including D-glucose; Zidovudine; and paraquat based on RNA-seq and microarray studies. Human AKAP17A enables protein kinase A binding activity. Is an ortholog of human AKAP17A (A-kinase anchoring protein 17A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C07H6.8 | |||||||
| Corresponding_transcript | C07H6.8.1 | ||||||||
| C07H6.8.2 | |||||||||
| C07H6.8.3 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf651209 | ||||||||
| WBsf226997 | |||||||||
| WBsf226998 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00067765 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000564 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00068169 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067171 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040048 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076019 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067357 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010415 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067158 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022491 | ||||||||
| Expr1030528 | |||||||||
| Expr1144115 | |||||||||
| Expr2010635 | |||||||||
| Expr2028875 | |||||||||
| Drives_construct | WBCnstr00037247 | ||||||||
| Construct_product | WBCnstr00037247 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction | WBInteraction000006612 | ||||||||
| WBInteraction000006625 | |||||||||
| WBInteraction000006811 | |||||||||
| WBInteraction000007219 | |||||||||
| WBInteraction000007623 | |||||||||
| WBInteraction000416955 | |||||||||
| Map_info | Map | III | Position | -0.711449 | Error | 0.005403 | |||
| Positive | Positive_clone | C07H6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004941 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
