WormBase Tree Display for Gene: WBGene00000799

WBGene00000799 Evidence: Paper_evidence: WBPaper00005857
  SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: CGC_name: crn-6 Person_evidence: WBPerson1606
      Sequence_name: K04H4.6
      Molecular_name: K04H4.6a
        K04H4.6a.1
        CE25043
        K04H4.6b
        CE31813
        K04H4.6b.1
      Other_name: CELE_K04H4.6 Accession_evidence: NDB BX284603
      Public_name: crn-6
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: crn
    Allele (42)
    Strain: WBStrain00003584
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog: WBGene00055115 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031581 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00163572 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193866 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00054748 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00120163 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00124116 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00225083 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5364 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6820 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5717 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20081 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3295 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17743 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11374 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7266 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g18993 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5617 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3347 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00090.g4042 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02064.g16906 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-crn-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9382 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01114.g18493 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07429 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009415 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00849 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12877 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4594 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30268400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8598 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00123583 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216355 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00239826 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00296362 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301664 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0000477 Drosophila melanogaster From_analysis: OMA
            OrthoFinder
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-090824-2 Danio rerio From_analysis: OMA
            OrthoFinder
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-010724-16 Danio rerio From_analysis: OMA
            OrthoFinder
            OrthoInspector
            Panther
      HGNC:28875 Homo sapiens From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1329019 Mus musculus From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:621457 Rattus norvegicus From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Paralog: WBGene00003828 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007056 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: crn-6 encodes a cell-death related nuclease, a type II DNase, likely involved in apoptotic DNA fragmentation. Paper_evidence: WBPaper00005857
          Curator_confirmed: WBPerson324
          Date_last_updated: 22 Oct 2010 00:00:00
      Automated_description: Enables deoxyribonuclease II activity. Involved in apoptotic DNA fragmentation. Is an ortholog of human DNASE2B (deoxyribonuclease 2 beta). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K04H4.6a
      K04H4.6b
    Corresponding_CDS_history: K04H4.6b:wp85
    Corresponding_transcript: K04H4.6a.1
      K04H4.6b.1
    Other_sequence: GW409441.1
      PSC04364_1
      Acan_isotig12512
      Acan_isotig15279
    Associated_feature: WBsf645482
      WBsf993674
      WBsf1015600
      WBsf225553
      WBsf225554
      WBsf225555
      WBsf225556
      WBsf225557
  Experimental_info: RNAi_result: WBRNAi00033977 Inferred_automatically: RNAi_primary
      WBRNAi00016615 Inferred_automatically: RNAi_primary
      WBRNAi00006155 Inferred_automatically: RNAi_primary
      WBRNAi00087550 Inferred_automatically: RNAi_primary
      WBRNAi00049961 Inferred_automatically: RNAi_primary
      WBRNAi00073187 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6328
      Expr15883
      Expr1026730
      Expr1030498
      Expr1153656
      Expr2010541
      Expr2028781
    Drives_construct: WBCnstr00004036
      WBCnstr00005867
      WBCnstr00005868
      WBCnstr00005869
      WBCnstr00005870
      WBCnstr00037267
      WBCnstr00042576
    Construct_product: WBCnstr00005865
      WBCnstr00005866
      WBCnstr00005867
      WBCnstr00005868
      WBCnstr00037267
    Microarray_results (31)
    Expression_cluster (181)
    Interaction: WBInteraction000049169
      WBInteraction000049170
      WBInteraction000049171
      WBInteraction000134143
      WBInteraction000146275
      WBInteraction000415831
      WBInteraction000541456
      WBInteraction000541457
    WBProcess: WBbiopr:00000014
  Map_info: Map: III Position: 0.445087 Error: 0.004933
    Positive: Positive_clone: K04H4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene