WormBase Tree Display for Gene: WBGene00000781
expand all nodes | collapse all nodes | view schema
WBGene00000781 | Evidence | Paper_evidence | WBPaper00001510 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C52E4 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | cpr-1 | |||||||
Sequence_name | C52E4.1 | ||||||||
Molecular_name | C52E4.1 | ||||||||
C52E4.1.1 | |||||||||
CE31896 | |||||||||
Other_name | CPROT/1 | ||||||||
gcp-1 | |||||||||
CELE_C52E4.1 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | cpr-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Name_change | Sequence_name | C52E4.1 | |||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cpr | ||||||||
Allele (24) | |||||||||
Legacy_information | [C.elegansII] NMK. Encodes 329 aa protein (pka gcp-1) with 40-50% identity to cysteine proteases; 1.1 kb transcript intestine specific, present in larvae and adults, not embryos. [Ray and McKerrow 1992] | ||||||||
Strain | WBStrain00031962 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00040331 | ||||||||
00040332 | |||||||||
00040333 | |||||||||
00040334 | |||||||||
00040335 | |||||||||
00040336 | |||||||||
00040337 | |||||||||
00107782 | |||||||||
00107783 | |||||||||
Ortholog (58) | |||||||||
Paralog (28) | |||||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:9351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||
DOID:11054 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:2671 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:10941 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:12842 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:3068 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:4914 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2527) | ||||||
Molecular_info | Corresponding_CDS | C52E4.1 | |||||||
Corresponding_CDS_history | C52E4.1:wp87 | ||||||||
Corresponding_transcript | C52E4.1.1 | ||||||||
Other_sequence (143) | |||||||||
Associated_feature | WBsf977952 | Paper_evidence | WBPaper00003232 | ||||||
WBsf977953 | Paper_evidence | WBPaper00003232 | |||||||
WBsf977954 | Paper_evidence | WBPaper00003232 | |||||||
WBsf977955 | Paper_evidence | WBPaper00003232 | |||||||
WBsf1001494 | |||||||||
WBsf1001495 | |||||||||
WBsf1020522 | |||||||||
WBsf232581 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr621 | ||||||||
Expr681 | |||||||||
Expr682 | |||||||||
Expr1011903 | |||||||||
Expr1030484 | |||||||||
Expr1147006 | |||||||||
Expr2010502 | |||||||||
Expr2028742 | |||||||||
Drives_construct | WBCnstr00011019 | ||||||||
WBCnstr00012451 | |||||||||
WBCnstr00015099 | |||||||||
WBCnstr00015100 | |||||||||
WBCnstr00020174 | |||||||||
WBCnstr00037281 | |||||||||
Construct_product | WBCnstr00037281 | ||||||||
Antibody | WBAntibody00001241 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (421) | |||||||||
Interaction (183) | |||||||||
WBProcess | WBbiopr:00000039 | ||||||||
Map_info | Map | V | Position | 3.54654 | Error | 0.001507 | |||
Positive | Positive_clone (2) | ||||||||
Mapping_data | Multi_point | 4951 | |||||||
Pseudo_map_position | |||||||||
Reference (26) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |