WormBase Tree Display for Gene: WBGene00000747

WBGene00000747 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F46C8
  Identity: Version: 1
    Name: CGC_name: col-174 Person_evidence: WBPerson345
      Sequence_name: F46C8.2
      Molecular_name: F46C8.2
        F46C8.2.1
        CE04577
      Other_name: CELE_F46C8.2 Accession_evidence: NDB BX284606
      Public_name: col-174
    DB_info: Database: AceView gene XI167
        WormQTL gene WBGene00000747
        WormFlux gene WBGene00000747
        NDB locus_tag CELE_F46C8.2
        Panther gene CAEEL|WormBase=WBGene00000747|UniProtKB=Q9GYP3
          family PTHR24637
        NCBI gene 181014
        RefSeq protein NM_076875.8
        TrEMBL UniProtAcc Q9GYP3
        UniProt_GCRP UniProtAcc Q9GYP3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (41)
    RNASeq_FPKM (74)
    GO_annotation: 00092848
      00092849
      00092850
      00107734
    Ortholog (32)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F46C8.2
    Corresponding_transcript: F46C8.2.1
    Other_sequence (32)
    Associated_feature: WBsf648313
      WBsf655191
      WBsf1005874
      WBsf1023265
      WBsf235943
      WBsf235944
  Experimental_info: RNAi_result: WBRNAi00032360 Inferred_automatically: RNAi_primary
      WBRNAi00047515 Inferred_automatically: RNAi_primary
      WBRNAi00015082 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025993
      Expr1030456
      Expr1151354
      Expr2010368
      Expr2028611
    Drives_construct: WBCnstr00037311
    Construct_product: WBCnstr00037311
    Microarray_results (19)
    Expression_cluster (193)
    Interaction: WBInteraction000107046
      WBInteraction000125151
      WBInteraction000137744
      WBInteraction000159558
      WBInteraction000159920
      WBInteraction000164005
      WBInteraction000188263
      WBInteraction000192938
      WBInteraction000199974
      WBInteraction000205771
      WBInteraction000205986
      WBInteraction000209387
      WBInteraction000211432
      WBInteraction000214642
      WBInteraction000218668
      WBInteraction000218915
      WBInteraction000229447
      WBInteraction000235897
      WBInteraction000242495
      WBInteraction000247988
      WBInteraction000256057
      WBInteraction000256434
      WBInteraction000266721
      WBInteraction000266802
      WBInteraction000271930
      WBInteraction000281913
      WBInteraction000288211
      WBInteraction000297376
      WBInteraction000308881
      WBInteraction000311763
      WBInteraction000316107
      WBInteraction000321411
      WBInteraction000322306
      WBInteraction000324970
      WBInteraction000330641
      WBInteraction000332588
      WBInteraction000336906
      WBInteraction000350225
      WBInteraction000351269
      WBInteraction000357603
      WBInteraction000358547
      WBInteraction000359248
      WBInteraction000360549
      WBInteraction000370413
      WBInteraction000372271
      WBInteraction000374076
      WBInteraction000383149
      WBInteraction000385070
      WBInteraction000386864
      WBInteraction000408669
      WBInteraction000413016
      WBInteraction000414908
      WBInteraction000415925
      WBInteraction000420126
      WBInteraction000421130
      WBInteraction000440327
      WBInteraction000449317
      WBInteraction000451767
      WBInteraction000459502
      WBInteraction000463690
      WBInteraction000464209
      WBInteraction000473458
  Map_info: Map: X Position: -1.59867
    Positive: Positive_clone: F46C8 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00065080
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene