WormBase Tree Display for Gene: WBGene00000716
expand all nodes | collapse all nodes | view schema
| WBGene00000716 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | T15B7 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-143 | Person_evidence | WBPerson345 | |||||
| Sequence_name | T15B7.3 | ||||||||
| Molecular_name | T15B7.3 | ||||||||
| T15B7.3.1 | |||||||||
| CE13652 | |||||||||
| Other_name | CELE_T15B7.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | col-143 | ||||||||
| DB_info | Database | AceView | gene | 5H317 | |||||
| WormQTL | gene | WBGene00000716 | |||||||
| WormFlux | gene | WBGene00000716 | |||||||
| NDB | locus_tag | CELE_T15B7.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000716|UniProtKB=O17038 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 179073 | |||||||
| RefSeq | protein | NM_072337.8 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| TrEMBL | UniProtAcc | O17038 | |||||||
| UniProt_GCRP | UniProtAcc | O17038 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029191 | ||||||||
| 00029192 | |||||||||
| 00029193 | |||||||||
| 00107704 | |||||||||
| Ortholog (42) | |||||||||
| Paralog (170) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T15B7.3 | |||||||
| Corresponding_transcript | T15B7.3.1 | ||||||||
| Other_sequence (79) | |||||||||
| Associated_feature | WBsf231915 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053365 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035589 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018740 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053366 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023317 | ||||||||
| Expr1030434 | |||||||||
| Expr1156946 | |||||||||
| Expr2010337 | |||||||||
| Expr2028580 | |||||||||
| Drives_construct | WBCnstr00037342 | ||||||||
| Construct_product | WBCnstr00037342 | ||||||||
| Microarray_results | SMD_T15B7.3 | ||||||||
| 188456_at | |||||||||
| A_12_P102451 | |||||||||
| Aff_T15B7.3 | |||||||||
| GPL13394_WBGene00000716 | |||||||||
| GPL13914_T15B7.3 | |||||||||
| GPL14144_T15B7.3_116-175_0.887_1_A | |||||||||
| GPL19516_CGZ0035250 | |||||||||
| GPL21109_T15B7.3 | |||||||||
| GPL3518_CE13652 | |||||||||
| GPL8304_CE_WBGene00000716_A | |||||||||
| GPL8304_CE_WBGene00000716_B | |||||||||
| GPL8673_T15B7_3P00806 | |||||||||
| GPL8673_T15B7_3P00854 | |||||||||
| GPL8673_T15B7_3P00901 | |||||||||
| GPL9450_T15B7.3 | |||||||||
| cea2.p.124718 | |||||||||
| Expression_cluster (301) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | V | Position | 0.317072 | Error | 0.002879 | |||
| Positive | Positive_clone | T15B7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025088 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
