WormBase Tree Display for Gene: WBGene00000701

WBGene00000701 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F54D1
  Identity: Version: 1
    Name: CGC_name: col-127 Person_evidence: WBPerson345
      Sequence_name: F54D1.3
      Molecular_name: F54D1.3
        F54D1.3.1
        CE05937
      Other_name: CELE_F54D1.3 Accession_evidence: NDB BX284604
      Public_name: col-127
    DB_info: Database: AceView gene 4M30
        WormQTL gene WBGene00000701
        WormFlux gene WBGene00000701
        NDB locus_tag CELE_F54D1.3
        NCBI gene 186228
        RefSeq protein NM_069715.3
        TREEFAM TREEFAM_ID TF316783
        TrEMBL UniProtAcc G5EFU8
        UniProt_GCRP UniProtAcc G5EFU8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele: WBVar01500079
      WBVar01498996
      WBVar01581774
      WBVar01499925
      WBVar01499585
      WBVar01499586
      WBVar02037168
      WBVar01500245
    RNASeq_FPKM (74)
    GO_annotation: 00107693
    Ortholog (55)
    Paralog (39)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D1.3
    Corresponding_CDS_history: F54D1.3:wp228
    Corresponding_transcript: F54D1.3.1
    Other_sequence (79)
    Associated_feature: WBsf230851
  Experimental_info: RNAi_result: WBRNAi00048279 Inferred_automatically: RNAi_primary
      WBRNAi00015595 Inferred_automatically: RNAi_primary
      WBRNAi00048280 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1152082
      Expr2010322
      Expr2028566
    Drives_construct: WBCnstr00037356
    Construct_product: WBCnstr00037356
    Microarray_results: SMD_F54D1.3
      SMD_F54D1.4:2
      172794_x_at
      189978_s_at
      Aff_F54D1.2
    Expression_cluster (86)
    Interaction: WBInteraction000101279
      WBInteraction000101287
      WBInteraction000101696
      WBInteraction000101856
      WBInteraction000102247
      WBInteraction000102706
      WBInteraction000103071
      WBInteraction000103512
      WBInteraction000103670
      WBInteraction000103967
      WBInteraction000104009
      WBInteraction000104998
      WBInteraction000105179
      WBInteraction000105630
      WBInteraction000106165
      WBInteraction000106566
      WBInteraction000106991
      WBInteraction000109583
      WBInteraction000112694
      WBInteraction000112945
      WBInteraction000118956
      WBInteraction000120499
      WBInteraction000122167
      WBInteraction000124346
      WBInteraction000134873
      WBInteraction000136381
      WBInteraction000137650
      WBInteraction000148000
      WBInteraction000157319
      WBInteraction000160942
      WBInteraction000163324
      WBInteraction000168222
      WBInteraction000170458
      WBInteraction000175271
      WBInteraction000175338
      WBInteraction000192034
      WBInteraction000192781
      WBInteraction000200604
      WBInteraction000202736
      WBInteraction000212227
      WBInteraction000212788
      WBInteraction000213588
      WBInteraction000222311
      WBInteraction000232273
      WBInteraction000234694
      WBInteraction000248885
      WBInteraction000250138
      WBInteraction000255264
      WBInteraction000258952
      WBInteraction000267817
      WBInteraction000270823
      WBInteraction000271152
      WBInteraction000275552
      WBInteraction000281257
      WBInteraction000285939
      WBInteraction000293877
      WBInteraction000296380
      WBInteraction000296692
      WBInteraction000332554
      WBInteraction000334808
      WBInteraction000340298
      WBInteraction000346887
      WBInteraction000347000
      WBInteraction000349442
      WBInteraction000355391
      WBInteraction000361295
      WBInteraction000364115
      WBInteraction000367427
      WBInteraction000370628
      WBInteraction000376101
      WBInteraction000379051
      WBInteraction000382675
      WBInteraction000385152
      WBInteraction000387191
      WBInteraction000390250
      WBInteraction000399160
      WBInteraction000400716
      WBInteraction000409877
      WBInteraction000413419
      WBInteraction000414595
      WBInteraction000427556
      WBInteraction000433243
      WBInteraction000435751
      WBInteraction000437260
      WBInteraction000443836
      WBInteraction000446736
      WBInteraction000455114
      WBInteraction000464901
      WBInteraction000467110
      WBInteraction000467683
  Map_info: Map: IV Position: 4.93428
    Positive: Positive_clone: F54D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00059172
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene