WormBase Tree Display for Gene: WBGene00000700

WBGene00000700 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F54D1
  Identity: Version: 1
    Name: CGC_name: col-126 Person_evidence: WBPerson345
      Sequence_name: F54D1.2
      Molecular_name: F54D1.2
        F54D1.2.1
        CE05937
      Other_name: CELE_F54D1.2 Accession_evidence: NDB BX284604
      Public_name: col-126
    DB_info: Database: AceView gene 4M29
        WormFlux gene WBGene00000700
        NDB locus_tag CELE_F54D1.2
        Panther gene CAEEL|WormBase=WBGene00000700|UniProtKB=G5EFU8
          family PTHR24637
        NCBI gene 178034
        RefSeq protein NM_069714.2
        TREEFAM TREEFAM_ID TF316783
        TrEMBL UniProtAcc G5EFU8
        UniProt_GCRP UniProtAcc G5EFU8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele: WBVar01500079
      WBVar01498996
      WBVar01499925
      WBVar01499585
      WBVar01499586
      WBVar01500245
    RNASeq_FPKM (74)
    GO_annotation: 00018857
      00018858
      00107692
    Ortholog (54)
    Paralog (40)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D1.2
    Corresponding_CDS_history: F54D1.2:wp196
      F54D1.2:wp231
    Corresponding_transcript: F54D1.2.1
    Other_sequence (72)
    Associated_feature: WBsf229124
  Experimental_info: RNAi_result: WBRNAi00048279 Inferred_automatically: RNAi_primary
      WBRNAi00015595 Inferred_automatically: RNAi_primary
      WBRNAi00032772 Inferred_automatically: RNAi_primary
      WBRNAi00048280 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021644
      Expr1152081
    Drives_construct: WBCnstr00037357
    Construct_product: WBCnstr00037357
    Microarray_results (19)
    Expression_cluster (116)
    SAGE_tag: SAGE:atcaagttcttgatgga Strand: Sense
        Unambiguously_mapped
      SAGE:atcaagttct Strand: Sense
        Unambiguously_mapped
    Interaction: WBInteraction000100329
      WBInteraction000102928
      WBInteraction000103058
      WBInteraction000103306
      WBInteraction000103840
      WBInteraction000104335
      WBInteraction000104582
      WBInteraction000104691
      WBInteraction000104822
      WBInteraction000107108
      WBInteraction000110042
      WBInteraction000110536
      WBInteraction000111167
      WBInteraction000112750
      WBInteraction000113036
      WBInteraction000115697
      WBInteraction000118156
      WBInteraction000119599
      WBInteraction000125812
      WBInteraction000134895
      WBInteraction000136718
      WBInteraction000142405
      WBInteraction000150113
      WBInteraction000163592
      WBInteraction000172204
      WBInteraction000177846
      WBInteraction000183231
      WBInteraction000185820
      WBInteraction000191249
      WBInteraction000200551
      WBInteraction000205885
      WBInteraction000210274
      WBInteraction000215718
      WBInteraction000219174
      WBInteraction000226144
      WBInteraction000226344
      WBInteraction000234773
      WBInteraction000258037
      WBInteraction000260876
      WBInteraction000265384
      WBInteraction000281256
      WBInteraction000288058
      WBInteraction000296516
      WBInteraction000297604
      WBInteraction000306656
      WBInteraction000307085
      WBInteraction000308835
      WBInteraction000313710
      WBInteraction000346999
      WBInteraction000352308
      WBInteraction000360555
      WBInteraction000367426
      WBInteraction000382674
      WBInteraction000385151
      WBInteraction000390126
      WBInteraction000392173
      WBInteraction000397752
      WBInteraction000399588
      WBInteraction000400715
      WBInteraction000406572
      WBInteraction000413418
      WBInteraction000415512
      WBInteraction000423436
      WBInteraction000423535
      WBInteraction000433318
      WBInteraction000441969
      WBInteraction000454034
      WBInteraction000464900
      WBInteraction000467109
      WBInteraction000467682
  Map_info: Map: IV Position: 4.93363
    Positive: Positive_clone: F54D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00055090
    WBPaper00059172
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene