WormBase Tree Display for Gene: WBGene00000699

WBGene00000699 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: C29F4
  Identity: Version: 1
    Name: CGC_name: col-125 Person_evidence: WBPerson345
      Sequence_name: C29F4.1
      Molecular_name: C29F4.1
        C29F4.1.1
        CE03038
      Other_name: CELE_C29F4.1 Accession_evidence: NDB BX284604
      Public_name: col-125
    DB_info: Database: AceView gene 4L991
        WormQTL gene WBGene00000699
        WormFlux gene WBGene00000699
        NDB locus_tag CELE_C29F4.1
        Panther gene CAEEL|WormBase=WBGene00000699|UniProtKB=Q18302
          family PTHR24637
        NCBI gene 178029
        RefSeq protein NM_069706.9
        TrEMBL UniProtAcc Q18302
        UniProt_GCRP UniProtAcc Q18302
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (39)
    Strain: WBStrain00051210
    RNASeq_FPKM (74)
    GO_annotation: 00060871
      00060872
      00060873
      00107691
    Ortholog (37)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29F4.1
    Corresponding_transcript: C29F4.1.1
    Other_sequence: BU585585.1
      FD515469.1
      FF679721.1
      CJC08396_1
      BE760959.1
      HGC02759_1
      FK805331.1
      JI179584.1
      EX008219.1
      HGC03458_1
      AI665821.1
      CJC05467_1
      TDC02643_1
      CRC07060_1
      AM744322.1
      AW355781.1
      AS01115
      AA629460.1
      CR00043
      CR02600
      HGC01563_1
      BXC03109_1
      BMC00054_1
      PPC02003_1
      BMC15595_1
      BXC01674_1
      BE491777.1
      PPC01150_1
      AS02997
      Oden_isotig21410
      FG975363.1
      CR12664
      NBC00315_1
      JI178772.1
      CK850147.1
      HGC03189_1
      HGC12340_1
      MH05184
      CK855376.1
      AM744652.1
      CK854797.1
      MIC08436_1
      FG979725.1
      MJC02549_1
      EX012866.1
      ES740746.1
      HG02503
      NB07968
      GO252709.1
      EX011673.1
      ES409979.1
      HGC00151_3
      ASC00097_1
      PPC11833_1
      ES414320.1
      EX007004.1
      BG734442.1
      EX914992.1
      FD515058.1
      HG00919
      AI511563.1
      SRC10370_1
      EX008739.1
      BXC02190_1
      ES413569.1
      Tcir_isotig14544
      AW453434.1
      WBC02536_1
      HGC03158_1
      AW980141.1
      CJC02367_1
      CRC09699_1
      CBC02888_1
      BXC02134_1
      FG971270.1
      HGC00151_2
      MPC01075_1
      CJC12658_1
      CRC02905_1
      HGC04695_1
      HG03509
      Dviv_isotig23992
      BXC02802_1
      AI096319.1
      CJC15626_1
      PP00498
      FG619526.1
      CR05994
      CJC12166_1
      MP01172
      Oden_isotig20447
      GE626293.1
      HG00854
      PP00187
      HBC16922_1
      HBC25720_1
      CBC12053_1
      PPC20769_1
      CR02759
      AI110535.1
      CR08980
      HBC25927_1
      CRC08997_1
      BUC00015_1
      Tcir_isotig06847
      ZP00200
      EX913230.1
      MH02604
      EX009629.1
      HG07985
      CSC00302_1
      SRC00528_2
      CRC07166_1
      PPC00979_1
      ALC00094_1
      EX013966.1
      CRC07723_1
      ASC01990_1
      FG979502.1
      Oden_isotig16688
      EX011884.1
      JI181837.1
      CR09594
      FG980824.1
      HG07806
      HGC00151_1
      EX008728.1
      ES740885.1
      ES412655.1
      CBC09315_1
      CK854808.1
    Associated_feature: WBsf646365
      WBsf997797
      WBsf229120
  Experimental_info: RNAi_result: WBRNAi00027488 Inferred_automatically: RNAi_primary
      WBRNAi00019391 Inferred_automatically: RNAi_primary
      WBRNAi00071907 Inferred_automatically: RNAi_primary
      WBRNAi00054396 Inferred_automatically: RNAi_primary
      WBRNAi00026424 Inferred_automatically: RNAi_primary
      WBRNAi00041467 Inferred_automatically: RNAi_primary
      WBRNAi00029321 Inferred_automatically: RNAi_primary
      WBRNAi00071434 Inferred_automatically: RNAi_primary
      WBRNAi00023620 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021196
      Expr1030420
      Expr1145496
      Expr2010321
      Expr2028565
    Drives_construct: WBCnstr00037358
    Construct_product: WBCnstr00037358
    Microarray_results (16)
    Expression_cluster (329)
    Interaction (106)
  Map_info: Map: IV Position: 4.92761 Error: 0.000785
    Positive: Positive_clone: C29F4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028809
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene