WormBase Tree Display for Gene: WBGene00000690
expand all nodes | collapse all nodes | view schema
| WBGene00000690 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F17E9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-116 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F17E9.1 | ||||||||
| Molecular_name | F17E9.1 | ||||||||
| F17E9.1.1 | |||||||||
| CE07069 | |||||||||
| Other_name | CELE_F17E9.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | col-116 | ||||||||
| DB_info | Database | AceView | gene | 4J123 | |||||
| WormQTL | gene | WBGene00000690 | |||||||
| WormFlux | gene | WBGene00000690 | |||||||
| NDB | locus_tag | CELE_F17E9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000690|UniProtKB=O61525 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 184617 | |||||||
| RefSeq | protein | NM_069015.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316414 | |||||||
| TrEMBL | UniProtAcc | O61525 | |||||||
| UniProt_GCRP | UniProtAcc | O61525 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele | WBVar00926350 | ||||||||
| WBVar00926351 | |||||||||
| WBVar00926352 | |||||||||
| WBVar00926353 | |||||||||
| WBVar00926354 | |||||||||
| WBVar00926355 | |||||||||
| WBVar00926356 | |||||||||
| WBVar00926357 | |||||||||
| WBVar00260025 | |||||||||
| WBVar00926358 | |||||||||
| WBVar00926359 | |||||||||
| WBVar00926360 | |||||||||
| WBVar00260027 | |||||||||
| WBVar01500079 | |||||||||
| WBVar00926361 | |||||||||
| WBVar00926362 | |||||||||
| WBVar00926363 | |||||||||
| WBVar00926364 | |||||||||
| WBVar00926365 | |||||||||
| WBVar00926366 | |||||||||
| WBVar02067840 | |||||||||
| WBVar01498996 | |||||||||
| WBVar00430378 | |||||||||
| WBVar00430379 | |||||||||
| WBVar01499396 | |||||||||
| WBVar00430380 | |||||||||
| WBVar00430381 | |||||||||
| WBVar00430382 | |||||||||
| WBVar00430383 | |||||||||
| WBVar00254770 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00191044 | |||||||||
| WBVar00573661 | |||||||||
| WBVar00573662 | |||||||||
| WBVar02150097 | |||||||||
| WBVar01500245 | |||||||||
| Strain | WBStrain00055300 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00036060 | ||||||||
| 00036061 | |||||||||
| 00107682 | |||||||||
| Ortholog (21) | |||||||||
| Paralog (161) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17E9.1 | |||||||
| Corresponding_transcript | F17E9.1.1 | ||||||||
| Other_sequence | JI233224.1 | ||||||||
| CBC00269_1 | |||||||||
| AA670529.1 | |||||||||
| HCC00194_1 | |||||||||
| Associated_feature | WBsf228669 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00115372 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013472 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031079 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044894 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031075 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044890 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024571 | ||||||||
| Expr1148858 | |||||||||
| Expr2010313 | |||||||||
| Expr2028557 | |||||||||
| Drives_construct | WBCnstr00037366 | ||||||||
| Construct_product | WBCnstr00037366 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | IV | Position | 3.7129 | Error | 0.000506 | |||
| Positive | Positive_clone | F17E9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065080 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
