WormBase Tree Display for Gene: WBGene00000656
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WBGene00000656 | Evidence | Person_evidence | WBPerson345 | ||||
---|---|---|---|---|---|---|---|
WBPerson651 | |||||||
SMap | S_parent | Sequence | C09G5 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | col | ||||||
Allele (20) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00053979 | ||||||
00053980 | |||||||
00053981 | |||||||
00107652 | |||||||
Ortholog (36) | |||||||
Paralog (170) | |||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Is an ortholog of human COL21A1 (collagen type XXI alpha 1 chain). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:9975 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17025) | ||
Molecular_info | Corresponding_CDS | C09G5.5 | |||||
Corresponding_transcript | C09G5.5.1 | ||||||
Other_sequence (85) | |||||||
Associated_feature | WBsf222053 | ||||||
Experimental_info | RNAi_result | WBRNAi00010550 | Inferred_automatically | RNAi_primary | |||
WBRNAi00028740 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00114419 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028737 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00072831 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00072830 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040237 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020665 | ||||||
Expr1030386 | |||||||
Expr1144309 | |||||||
Expr2010427 | |||||||
Expr2028667 | |||||||
Drives_construct | WBCnstr00037394 | ||||||
Construct_product | WBCnstr00037394 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (309) | |||||||
Interaction (87) | |||||||
Map_info | Map | II | Position | 3.12398 | Error | 3.5e-05 | |
Positive | Positive_clone | C09G5 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00063976 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |