WormBase Tree Display for Gene: WBGene00000634

WBGene00000634 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F26B1
  Identity: Version: 1
    Name: CGC_name: col-58 Person_evidence: WBPerson345
      Sequence_name: F26B1.4
      Molecular_name: F26B1.4
        F26B1.4.1
        CE25863
      Other_name: CELE_F26B1.4 Accession_evidence: NDB BX284601
      Public_name: col-58
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (22)
    RNASeq_FPKM (74)
    GO_annotation: 00050439
      00050440
      00050441
      00107636
    Ortholog (27)
    Paralog (162)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 5. Is an ortholog of human COLQ (collagen like tail subunit of asymmetric acetylcholinesterase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110667 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2226)
  Molecular_info: Corresponding_CDS: F26B1.4
    Corresponding_CDS_history: F26B1.4:wp185
    Corresponding_transcript: F26B1.4.1
    Other_sequence: FC817774.1
      CBC13286_1
      BMC05175_1
      AA294675.1
    Associated_feature: WBsf643353
      WBsf643354
      WBsf217791
      WBsf217792
  Experimental_info: RNAi_result: WBRNAi00045599 Inferred_automatically: RNAi_primary
      WBRNAi00003477 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027909
      Expr1030375
      Expr1149509
      Expr2010409
      Expr2028651
    Drives_construct: WBCnstr00037410
    Construct_product: WBCnstr00037410
    Microarray_results (19)
    Expression_cluster (232)
    Interaction: WBInteraction000103877
      WBInteraction000105642
      WBInteraction000105725
      WBInteraction000107144
      WBInteraction000108967
      WBInteraction000109435
      WBInteraction000110308
      WBInteraction000111110
      WBInteraction000111116
      WBInteraction000114597
      WBInteraction000116273
      WBInteraction000118243
      WBInteraction000118913
      WBInteraction000119241
      WBInteraction000120162
      WBInteraction000121313
      WBInteraction000124630
      WBInteraction000125200
      WBInteraction000134381
      WBInteraction000137902
      WBInteraction000138942
      WBInteraction000139158
      WBInteraction000141564
      WBInteraction000142093
      WBInteraction000142197
      WBInteraction000142512
      WBInteraction000145479
      WBInteraction000149693
      WBInteraction000152700
      WBInteraction000157037
      WBInteraction000163458
      WBInteraction000163513
      WBInteraction000164343
      WBInteraction000165028
      WBInteraction000166539
      WBInteraction000168977
      WBInteraction000171018
      WBInteraction000177619
      WBInteraction000178806
      WBInteraction000178957
      WBInteraction000179555
      WBInteraction000180843
      WBInteraction000181383
      WBInteraction000181435
      WBInteraction000182302
      WBInteraction000182353
      WBInteraction000184743
      WBInteraction000185216
      WBInteraction000186249
      WBInteraction000190815
      WBInteraction000196324
      WBInteraction000200551
      WBInteraction000200596
      WBInteraction000202850
      WBInteraction000204194
      WBInteraction000210293
      WBInteraction000212052
      WBInteraction000212724
      WBInteraction000212788
      WBInteraction000213248
      WBInteraction000216006
      WBInteraction000216260
      WBInteraction000217120
      WBInteraction000223022
      WBInteraction000224738
      WBInteraction000226605
      WBInteraction000230483
      WBInteraction000230858
      WBInteraction000237991
      WBInteraction000239530
      WBInteraction000250906
      WBInteraction000253805
      WBInteraction000254594
      WBInteraction000261544
      WBInteraction000267914
      WBInteraction000271943
      WBInteraction000276389
      WBInteraction000278223
      WBInteraction000279995
      WBInteraction000284022
      WBInteraction000291960
      WBInteraction000294642
      WBInteraction000301662
      WBInteraction000302216
      WBInteraction000308490
      WBInteraction000311315
      WBInteraction000320233
      WBInteraction000330498
      WBInteraction000330786
      WBInteraction000331140
      WBInteraction000334717
      WBInteraction000335309
      WBInteraction000344608
      WBInteraction000358070
      WBInteraction000375249
      WBInteraction000376758
      WBInteraction000379714
      WBInteraction000379761
      WBInteraction000382438
      WBInteraction000383452
      WBInteraction000393598
      WBInteraction000406680
      WBInteraction000408712
      WBInteraction000420990
      WBInteraction000425322
      WBInteraction000434195
      WBInteraction000448280
      WBInteraction000467008
      WBInteraction000469906
      WBInteraction000470666
      WBInteraction000472467
      WBInteraction000472720
      WBInteraction000474983
  Map_info: Map: I Position: 0.939368 Error: 0.003376
    Positive: Positive_clone: F26B1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene