WormBase Tree Display for Gene: WBGene00000515

WBGene00000515 Evidence: Paper_evidence: WBPaper00005916
  SMap: S_parent: Sequence: T27A10
  Identity: Version: 1
    Name: CGC_name: ckc-1
      Sequence_name: T27A10.3
      Molecular_name: T27A10.3a
        T27A10.3a.1
        CE07553
        T27A10.3b
        CE33710
        T27A10.3b.1
        T27A10.3b.2
      Other_name: CELE_T27A10.3 Accession_evidence: NDB BX284606
      Public_name: ckc-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ckc
    Allele (33)
    RNASeq_FPKM (74)
    GO_annotation: 00076543
      00076544
      00076545
      00076546
      00076547
    Ortholog: WBGene00051957 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034801 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00122437 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00194007 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098784 Pristionchus pacificus From_analysis: OMA
      WBGene00226297 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2527 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13121 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18755 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10457 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g414 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1784 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g402 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15621 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20533 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22490 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-ckc-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18190 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00003.g170 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00808 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024126 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07553 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20321 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0268500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18777 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241321 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257692 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285634 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297770 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0000536 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-050913-135 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030328-21 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:25575 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:24649 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1922570 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2443760 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308204 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1305304 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00000509 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000510 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000511 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000512 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000513 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00000514 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: ckc-1 encodes a putative ethanolamine or choline kinase, with somewhatmore sequence similarity to ethanolamine kinases; CKC-1 is the sole memberof a 'C' group of choline/ethanolamine kinases. Paper_evidence: WBPaper00005916
          Curator_confirmed: WBPerson567
          Date_last_updated: 11 Aug 2006 00:00:00
      Automated_description: Predicted to enable ethanolamine kinase activity. Predicted to be involved in phosphatidylethanolamine biosynthetic process. Predicted to be located in cytoplasm. Is an ortholog of human ETNK2 (ethanolamine kinase 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T27A10.3a
      T27A10.3b
    Corresponding_transcript: T27A10.3a.1
      T27A10.3b.1
      T27A10.3b.2
    Other_sequence (26)
    Associated_feature: WBsf647956
      WBsf662613
      WBsf662614
      WBsf1004668
      WBsf1022637
      WBsf235503
      WBsf235504
      WBsf235505
      WBsf235506
      WBsf235507
  Experimental_info: RNAi_result: WBRNAi00054255 Inferred_automatically: RNAi_primary
      WBRNAi00083993 Inferred_automatically: RNAi_primary
      WBRNAi00019297 Inferred_automatically: RNAi_primary
      WBRNAi00084001 Inferred_automatically: RNAi_primary
      WBRNAi00036014 Inferred_automatically: RNAi_primary
      WBRNAi00084003 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012898
      Expr1030305
      Expr1157802
      Expr2010030
      Expr2028271
    Drives_construct: WBCnstr00037483
    Construct_product: WBCnstr00037483
    Microarray_results (28)
    Expression_cluster (155)
    Interaction (59)
  Map_info: Map: X Position: -10.0262
    Positive: Positive_clone: T27A10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (4)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene