WormBase Tree Display for Gene: WBGene00000498
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| WBGene00000498 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y39H10A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | chk-1 | Person_evidence | WBPerson1551 | |||||
| Sequence_name | Y39H10A.7 | ||||||||
| Molecular_name | Y39H10A.7a | ||||||||
| Y39H10A.7a.1 | |||||||||
| CE26076 | |||||||||
| Y39H10A.7b | |||||||||
| CE33867 | |||||||||
| Y39H10A.7b.1 | |||||||||
| Other_name | Y39H10A.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39H10A.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | chk-1 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | chk | ||||||||
| Allele (45) | |||||||||
| Strain | WBStrain00034800 | ||||||||
| WBStrain00034803 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (23) | |||||||||
| Contained_in_operon | CEOP5515 | ||||||||
| Ortholog (57) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Concise_description | chk-1 encodes a CHK1-like serine threonin protein kinase that affects fertility. | Paper_evidence | WBPaper00005039 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein serine/threonine kinase activity. Involved in embryo development and mitotic DNA replication checkpoint signaling. Predicted to be located in nucleus. Expressed in germ line. Human ortholog(s) of this gene implicated in pancreatic cancer. Is an ortholog of human CHEK1 (checkpoint kinase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1793 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1925) | ||||
| EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1925) | ||||||
| Molecular_info | Corresponding_CDS | Y39H10A.7a | |||||||
| Y39H10A.7b | |||||||||
| Corresponding_transcript | Y39H10A.7a.1 | ||||||||
| Y39H10A.7b.1 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf652545 | ||||||||
| WBsf668844 | |||||||||
| WBsf668845 | |||||||||
| WBsf668846 | |||||||||
| WBsf999681 | |||||||||
| WBsf999682 | |||||||||
| WBsf1019419 | |||||||||
| WBsf233520 | |||||||||
| WBsf233521 | |||||||||
| WBsf233522 | |||||||||
| Experimental_info | RNAi_result (53) | ||||||||
| Expr_pattern | Expr3082 | ||||||||
| Expr4894 | |||||||||
| Expr9219 | |||||||||
| Expr1011525 | |||||||||
| Expr1030294 | |||||||||
| Expr1159784 | |||||||||
| Expr1200236 | |||||||||
| Expr2009991 | |||||||||
| Expr2028232 | |||||||||
| Drives_construct | WBCnstr00037496 | ||||||||
| WBCnstr00038171 | |||||||||
| Construct_product | WBCnstr00037496 | ||||||||
| WBCnstr00038171 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (138) | |||||||||
| Map_info | Map | V | Position | -8.01265 | Error | 0.002467 | |||
| Positive | Positive_clone | Y39H10A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5377 | |||||||
| Pseudo_map_position | |||||||||
| Reference (51) | |||||||||
| Remark | Sequence connection from [Boulton S, Vidal M] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
