WormBase Tree Display for Gene: WBGene00000466

WBGene00000466 SMap: S_parent: Sequence: C03D6
  Identity: Version: 1
    Name: CGC_name: cel-1
      Sequence_name: C03D6.3
      Molecular_name: C03D6.3a
        C03D6.3a.1
        CE32300
        C03D6.3b
        CE05197
        C03D6.3b.1
      Other_name: CELE_C03D6.3 Accession_evidence: NDB BX284601
      Public_name: cel-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cel
    Allele (51)
    Legacy_information: [Moore CR] cel for Capping Enzyme famiLy. No mutants known. Encodes predicted capping enzyme, N-term domain has RNA triphosphatase activity, no detectable PTP activity.
    Strain: WBStrain00002815
      WBStrain00035951
      WBStrain00036195
    RNASeq_FPKM (74)
    GO_annotation (36)
    Ortholog (42)
    Paralog: WBGene00011967 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00010037 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: cel-1 encodes a mRNA capping enzyme, with a N-terminal region with RNA triphosphatase activity and a C-terminal region containing motifs found in yeast and vaccinia virus capping enzyme guanylytransferases; cel-1 is required for embryonic viability, body morphology, and vulval development. Paper_evidence: WBPaper00002809
            WBPaper00004402
            WBPaper00004540
            WBPaper00005844
            WBPaper00005845
          Curator_confirmed: WBPerson48
            WBPerson324
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables polynucleotide 5'-phosphatase activity. Involved in polynucleotide 5' dephosphorylation and positive regulation of gene expression. Located in nucleus. Expressed in tail. Is an ortholog of human RNGTT (RNA guanylyltransferase and 5'-phosphatase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C03D6.3a
      C03D6.3b
    Corresponding_CDS_history: C03D6.3:wp90
    Corresponding_transcript: C03D6.3a.1
      C03D6.3b.1
    Other_sequence (42)
    Associated_feature: WBsf643605
      WBsf656780
      WBsf984772
      WBsf218322
      WBsf218323
  Experimental_info: RNAi_result (26)
    Expr_pattern: Chronogram1720
      Chronogram1722
      Expr5125
      Expr5126
      Expr1022220
      Expr1030270
      Expr1143619
      Expr2009921
      Expr2028161
    Drives_construct: WBCnstr00003342
      WBCnstr00003343
      WBCnstr00037516
    Construct_product: WBCnstr00037516
    Microarray_results (27)
    Expression_cluster (82)
    Interaction: WBInteraction000007853
      WBInteraction000034438
      WBInteraction000035446
      WBInteraction000035447
      WBInteraction000036498
      WBInteraction000037418
      WBInteraction000037431
      WBInteraction000037438
      WBInteraction000037565
      WBInteraction000037566
      WBInteraction000037853
      WBInteraction000039906
      WBInteraction000041427
      WBInteraction000041428
      WBInteraction000042344
      WBInteraction000042478
      WBInteraction000043429
      WBInteraction000043595
      WBInteraction000043596
      WBInteraction000044266
      WBInteraction000048426
      WBInteraction000050398
      WBInteraction000156701
      WBInteraction000191976
      WBInteraction000217224
      WBInteraction000233962
      WBInteraction000266638
      WBInteraction000277975
      WBInteraction000278522
      WBInteraction000279644
      WBInteraction000284999
      WBInteraction000291433
      WBInteraction000298171
      WBInteraction000298853
      WBInteraction000300945
      WBInteraction000301696
      WBInteraction000319650
      WBInteraction000355834
      WBInteraction000369932
      WBInteraction000376476
      WBInteraction000376587
      WBInteraction000380928
      WBInteraction000390889
      WBInteraction000395913
      WBInteraction000402740
      WBInteraction000408312
      WBInteraction000416185
      WBInteraction000416742
      WBInteraction000444242
      WBInteraction000445356
      WBInteraction000447055
      WBInteraction000447137
      WBInteraction000450811
      WBInteraction000452226
      WBInteraction000500685
      WBInteraction000500686
      WBInteraction000518645
      WBInteraction000549324
      WBInteraction000559044
      WBInteraction000573998
      WBInteraction000582708
  Map_info: Map: I Position: 3.85263 Error: 0.002334
    Positive: Positive_clone: C03D6 Author_evidence: Moore CR
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4781
        5019
    Pseudo_map_position
  Reference (14)
  Remark: [JAH] This is NOT a tyrosine protein phosphatase
    Data extracted from Takagi et al. (1997)
    cel-1 has also been used as an unofficial name for exc-7 (WBGene00001368)
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene