WormBase Tree Display for Gene: WBGene00000442
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| WBGene00000442 | SMap | S_parent | Sequence | F20D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ceh-19 | Person_evidence | WBPerson83 | |||||
| Sequence_name | F20D12.6 | ||||||||
| Molecular_name | F20D12.6a | ||||||||
| F20D12.6a.1 | |||||||||
| CE31687 | |||||||||
| F20D12.6b | |||||||||
| CE04436 | |||||||||
| F20D12.6b.1 | |||||||||
| Other_name | CELE_F20D12.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ceh-19 | ||||||||
| DB_info | Database | AceView | gene | 4I718 | |||||
| WormQTL | gene | WBGene00000442 | |||||||
| WormFlux | gene | WBGene00000442 | |||||||
| NDB | locus_tag | CELE_F20D12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000442|UniProtKB=P26797 | |||||||
| family | PTHR24333 | ||||||||
| NCBI | gene | 177590 | |||||||
| RefSeq | protein | NM_001027971.6 | |||||||
| NM_001027970.4 | |||||||||
| SwissProt | UniProtAcc | P26797 | |||||||
| TREEFAM | TREEFAM_ID | TF316128 | |||||||
| UniProt_GCRP | UniProtAcc | P26797 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (45) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes predicted homeoprotein. [Naito et al. 1992; YK] | ||||||||
| Strain | WBStrain00001506 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00040338 | ||||||||
| 00040339 | |||||||||
| 00040340 | |||||||||
| 00040341 | |||||||||
| 00040342 | |||||||||
| 00107408 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00000451 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00000452 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | ceh-19 encodes a homeobox protein similar to Bar-like homeoproteins from Drosophila and vertebrates; it has no known function or expression pattern. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20D12.6a | |||||||
| F20D12.6b | |||||||||
| Corresponding_CDS_history | F20D12.6:wp83 | ||||||||
| Corresponding_transcript | F20D12.6a.1 | ||||||||
| F20D12.6b.1 | |||||||||
| Other_sequence | Dviv_isotig19819 | ||||||||
| JI246706.1 | |||||||||
| Oden_isotig25336 | |||||||||
| GPC00531_1 | |||||||||
| Dviv_isotig19818 | |||||||||
| GP01061 | |||||||||
| Acan_isotig12632 | |||||||||
| Associated_feature | WBsf651971 | ||||||||
| WBsf978288 | |||||||||
| WBsf997086 | |||||||||
| WBsf230360 | |||||||||
| WBsf230361 | |||||||||
| Transcription_factor | WBTranscriptionFactor000393 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031174 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045106 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5807 | ||||||||
| Expr7513 | |||||||||
| Expr10616 | |||||||||
| Expr15568 | |||||||||
| Expr1028321 | |||||||||
| Expr1149056 | |||||||||
| Expr2009865 | |||||||||
| Expr2028105 | |||||||||
| Drives_construct | WBCnstr00002364 | ||||||||
| WBCnstr00012658 | |||||||||
| WBCnstr00015812 | |||||||||
| WBCnstr00015813 | |||||||||
| WBCnstr00017111 | |||||||||
| WBCnstr00037535 | |||||||||
| Construct_product | WBCnstr00037535 | ||||||||
| WBCnstr00038857 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | IV | Position | 3.50698 | Error | 0.000876 | |||
| Positive | Positive_clone | F20D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| KB2 | |||||||||
| Mapping_data | Pos_neg_data | 6876 | |||||||
| Reference | WBPaper00001568 | ||||||||
| WBPaper00002006 | |||||||||
| WBPaper00002474 | |||||||||
| WBPaper00027309 | |||||||||
| WBPaper00031743 | |||||||||
| WBPaper00041911 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060123 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | comment sent by TR Burglin about sequence ID | ||||||||
| Method | Gene |
