WormBase Tree Display for Gene: WBGene00000382
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| WBGene00000382 | SMap | S_parent | Sequence | C43E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cdc-6 | |||||||
| Sequence_name | C43E11.10 | ||||||||
| Molecular_name | C43E11.10 | ||||||||
| C43E11.10.1 | |||||||||
| CE08688 | |||||||||
| Other_name | CELE_C43E11.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cdc-6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cdc | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00037796 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP1172 | ||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00012650 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | cdc-6 encodes a homolog of an origin complex component (CDC6) which in yeast controls the start of DNA replication, and also has a distant paralog (Y39A1A.12) within the C. elegans genome; CDC-6 is superficially dispensable for embryonic viability, perhaps because of redundancy with Y39A1A.12. | Paper_evidence | WBPaper00013079 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in mitotic DNA replication checkpoint signaling. Located in condensed nuclear chromosome; cytoplasm; and nucleolus. Expressed in seam cell. Human ortholog(s) of this gene implicated in Meier-Gorlin syndrome 5. Is an ortholog of human CDC6 (cell division cycle 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080516 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1744) | ||||
| Molecular_info | Corresponding_CDS | C43E11.10 | |||||||
| Corresponding_transcript | C43E11.10.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf649089 | ||||||||
| WBsf664135 | |||||||||
| WBsf219260 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Expr4680 | ||||||||
| Expr4681 | |||||||||
| Expr9926 | |||||||||
| Expr1028747 | |||||||||
| Expr1030208 | |||||||||
| Expr1146367 | |||||||||
| Expr2009790 | |||||||||
| Expr2028030 | |||||||||
| Drives_construct | WBCnstr00037581 | ||||||||
| Construct_product | WBCnstr00000444 | ||||||||
| WBCnstr00000445 | |||||||||
| WBCnstr00000446 | |||||||||
| WBCnstr00000447 | |||||||||
| WBCnstr00007279 | |||||||||
| WBCnstr00009675 | |||||||||
| WBCnstr00012168 | |||||||||
| WBCnstr00015914 | |||||||||
| WBCnstr00037581 | |||||||||
| Antibody | WBAntibody00001255 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (118) | |||||||||
| Map_info | Map | I | Position | -1.51655 | Error | 0.002838 | |||
| Positive | Positive_clone | C43E11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010683 | ||||||||
| WBPaper00010686 | |||||||||
| WBPaper00029399 | |||||||||
| WBPaper00033555 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040279 | |||||||||
| WBPaper00040645 | |||||||||
| WBPaper00045289 | |||||||||
| WBPaper00052102 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
