WormBase Tree Display for Gene: WBGene00000369
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| WBGene00000369 | SMap | S_parent | Sequence | Y56A3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ccf-1 | |||||||
| Sequence_name | Y56A3A.20 | ||||||||
| Molecular_name | Y56A3A.20 | ||||||||
| Y56A3A.20.1 | |||||||||
| CE22588 | |||||||||
| Other_name | CELE_Y56A3A.20 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ccf-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ccf | ||||||||
| Allele (56) | |||||||||
| Strain | WBStrain00035514 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (27) | |||||||||
| Contained_in_operon | CEOP3740 | ||||||||
| Ortholog (56) | |||||||||
| Structured_description | Automated_description | Predicted to enable poly(A)-specific ribonuclease activity. Involved in nuclear-transcribed mRNA poly(A) tail shortening and oogenesis. Located in P granule and P-body. Part of CCR4-NOT complex. Expressed in germ line. Is an ortholog of human CNOT7 (CCR4-NOT transcription complex subunit 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y56A3A.20 | |||||||
| Corresponding_transcript | Y56A3A.20.1 | ||||||||
| Other_sequence (58) | |||||||||
| Associated_feature | WBsf651526 | ||||||||
| WBsf667470 | |||||||||
| WBsf227615 | |||||||||
| WBsf227616 | |||||||||
| Experimental_info | RNAi_result (31) | ||||||||
| Expr_pattern | Expr3675 | ||||||||
| Expr8554 | |||||||||
| Expr11131 | |||||||||
| Expr1014241 | |||||||||
| Expr1030197 | |||||||||
| Expr1161008 | |||||||||
| Expr2009759 | |||||||||
| Expr2027999 | |||||||||
| Construct_product | WBCnstr00005582 | ||||||||
| Antibody | WBAntibody00002445 | ||||||||
| WBAntibody00002724 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (176) | |||||||||
| Map_info | Map | III | Position | 13.4709 | Error | 0.019053 | |||
| Positive | Positive_clone | Y56A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4180 | |||||||
| 5020 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (16) | |||||||||
| Remark | Sequence connection from Molin L [021008 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
