WormBase Tree Display for Gene: WBGene00000302
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| WBGene00000302 | SMap | S_parent | Sequence | C56A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | cav-2 | Person_evidence | WBPerson464 | |||||
| Sequence_name | C56A3.7 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_C56A3.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cav-2 | ||||||||
| DB_info | Database | AceView | gene | 5O39 | |||||
| WormQTL | gene | WBGene00000302 | |||||||
| WormFlux | gene | WBGene00000302 | |||||||
| NDB | locus_tag | CELE_C56A3.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000302|UniProtKB=Q18879 | |||||||
| family | PTHR10844 | ||||||||
| NCBI | gene | 179838 | |||||||
| RefSeq | protein | NM_001269596.3 | |||||||
| NM_001269595.3 | |||||||||
| NM_001269594.3 | |||||||||
| NM_001269597.3 | |||||||||
| SwissProt | UniProtAcc | Q18879 | |||||||
| TREEFAM | TREEFAM_ID | TF315736 | |||||||
| UniProt_GCRP | UniProtAcc | Q18879 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cav | ||||||||
| Allele (89) | |||||||||
| Legacy_information | No mutants known. Encodes predicted 261aa protein, 28% identical to cav-1. Residues 214-351 have 24% identity to mammalian caveolins. 2.4 kb transcript detected. Predicted gene C56A3.7 | ||||||||
| Strain | WBStrain00000430 | ||||||||
| WBStrain00003572 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00000301 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | C56A3.7a | |||||||
| C56A3.7b | |||||||||
| C56A3.7c | |||||||||
| C56A3.7d | |||||||||
| Corresponding_transcript | C56A3.7a.1 | ||||||||
| C56A3.7b.1 | |||||||||
| C56A3.7c.1 | |||||||||
| C56A3.7d.1 | |||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf647464 | ||||||||
| WBsf1001843 | |||||||||
| WBsf1001844 | |||||||||
| WBsf232786 | |||||||||
| WBsf232787 | |||||||||
| Experimental_info (8) | |||||||||
| Map_info | Map | V | Position | 5.45137 | Error | 0.007118 | |||
| Positive | Positive_clone | C56A3 | Person_evidence | WBPerson464 | |||||
| Author_evidence | Tang Z | ||||||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 4176 | |||||||
| 4324 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002653 | ||||||||
| WBPaper00003590 | |||||||||
| WBPaper00004384 | |||||||||
| WBPaper00006323 | |||||||||
| WBPaper00024791 | |||||||||
| WBPaper00027612 | |||||||||
| WBPaper00028448 | |||||||||
| WBPaper00035456 | |||||||||
| WBPaper00046406 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Data extracted from Tang et al. (1997) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
