WormBase Tree Display for Gene: WBGene00000286
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WBGene00000286 | SMap | S_parent | Sequence | C18E9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | cal-2 | Person_evidence | WBPerson261 | |||||
Sequence_name | C18E9.1 | ||||||||
Molecular_name | C18E9.1 | ||||||||
C18E9.1.1 | |||||||||
CE34702 | |||||||||
Other_name | CELE_C18E9.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | cal-2 | ||||||||
DB_info | Database | AceView | gene | 2J251 | |||||
WormQTL | gene | WBGene00000286 | |||||||
WormFlux | gene | WBGene00000286 | |||||||
NDB | locus_tag | CELE_C18E9.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000286|UniProtKB=G5EEG0 | |||||||
family | PTHR23050 | ||||||||
NCBI | gene | 182789 | |||||||
RefSeq | protein | NM_063505.6 | |||||||
TREEFAM | TREEFAM_ID | TF354258 | |||||||
TrEMBL | UniProtAcc | G5EEG0 | |||||||
UniProt_GCRP | UniProtAcc | G5EEG0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cal | ||||||||
Allele (14) | |||||||||
Strain | WBStrain00047669 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00016064 | ||||||||
00107174 | |||||||||
Ortholog (31) | |||||||||
Paralog (18) | |||||||||
Structured_description | Concise_description | cal-2 encodes a calmodulin homolog required for embryonic development or viability; CAL-2 is closely similar to its paralogs CAL-1, CAL-3, CAL-4 and CMD-1. | Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable calcium ion binding activity. Expressed in head neurons; hypodermis; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C18E9.1 | |||||||
Corresponding_CDS_history | C18E9.1:wp106 | ||||||||
Corresponding_transcript | C18E9.1.1 | ||||||||
Other_sequence (33) | |||||||||
Associated_feature | WBsf654906 | ||||||||
WBsf221838 | |||||||||
Experimental_info | RNAi_result | WBRNAi00008420 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040947 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000934 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029080 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076151 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029081 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr15535 | ||||||||
Expr1016499 | |||||||||
Expr1144991 | |||||||||
Expr2009702 | |||||||||
Expr2027941 | |||||||||
Drives_construct | WBCnstr00037604 | ||||||||
WBCnstr00042254 | |||||||||
Construct_product | WBCnstr00037604 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (159) | |||||||||
Interaction (84) | |||||||||
Map_info | Map | II | Position | 0.938124 | |||||
Positive | Positive_clone | C18E9 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00019540 | ||||||||
WBPaper00030971 | |||||||||
WBPaper00061878 | |||||||||
Remark | Sequence connection from [Schulze E, Karabinos A, Weber K], 02/06/11 krb | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |