WormBase Tree Display for Gene: WBGene00000276
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| WBGene00000276 | Evidence | Person_evidence | WBPerson2290 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F57B9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | byn-1 | Person_evidence | WBPerson2290 | |||||
| Sequence_name | F57B9.5 | ||||||||
| Molecular_name | F57B9.5 | ||||||||
| F57B9.5.1 | |||||||||
| CE25013 | |||||||||
| Other_name | CELE_F57B9.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | byn-1 | ||||||||
| DB_info | Database | AceView | gene | 3I25 | |||||
| WormQTL | gene | WBGene00000276 | |||||||
| WormFlux | gene | WBGene00000276 | |||||||
| NDB | locus_tag | CELE_F57B9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000276|UniProtKB=Q20932 | |||||||
| family | PTHR12821 | ||||||||
| NCBI | gene | 175968 | |||||||
| RefSeq | protein | NM_066109.6 | |||||||
| SwissProt | UniProtAcc | Q20932 | |||||||
| TREEFAM | TREEFAM_ID | TF312968 | |||||||
| UniProt_GCRP | UniProtAcc | Q20932 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | byn | ||||||||
| Allele (58) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069635 | ||||||||
| 00069636 | |||||||||
| 00069637 | |||||||||
| 00069638 | |||||||||
| 00069639 | |||||||||
| 00069640 | |||||||||
| Contained_in_operon | CEOP3404 | ||||||||
| Ortholog (36) | |||||||||
| Structured_description | Concise_description | byn-1 encodes a homolog of mammalian BYSTIN-LIKE (BYSL; OMIM:603871). | Paper_evidence | WBPaper00004588 | |||||
| WBPaper00012752 | |||||||||
| WBPaper00013616 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in cytoplasm and nucleolus. Predicted to be part of preribosome, small subunit precursor. Is an ortholog of human BYSL (bystin like). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57B9.5 | |||||||
| Corresponding_transcript | F57B9.5.1 | ||||||||
| Other_sequence | SC00103 | ||||||||
| FC814672.1 | |||||||||
| HC06218 | |||||||||
| HBC05740_1 | |||||||||
| HCC03065_1 | |||||||||
| EX828533.1 | |||||||||
| CRC11437_1 | |||||||||
| GPC01468_1 | |||||||||
| FG976076.1 | |||||||||
| CJC01047_1 | |||||||||
| TSC00021_1 | |||||||||
| Dviv_isotig24483 | |||||||||
| Hbac_isotig02140 | |||||||||
| EX565839.1 | |||||||||
| CBC03815_1 | |||||||||
| ES740948.1 | |||||||||
| CBC14070_1 | |||||||||
| GRC00394_1 | |||||||||
| GR978390.1 | |||||||||
| ACC21217_1 | |||||||||
| Name_isotig02730 | |||||||||
| GP02915 | |||||||||
| EX828462.1 | |||||||||
| JI171019.1 | |||||||||
| Acan_isotig11658 | |||||||||
| ES561258.1 | |||||||||
| CR02992 | |||||||||
| MH03094 | |||||||||
| EX828246.1 | |||||||||
| Tcir_isotig09909 | |||||||||
| MHC00179_1 | |||||||||
| BMC02084_1 | |||||||||
| Acan_isotig08489 | |||||||||
| CR12283 | |||||||||
| PPC17356_1 | |||||||||
| ACC14010_1 | |||||||||
| CBC03906_1 | |||||||||
| GR977966.1 | |||||||||
| SR05272 | |||||||||
| SRC01254_1 | |||||||||
| EX555776.1 | |||||||||
| Name_isotig06711 | |||||||||
| Oden_isotig19157 | |||||||||
| Tcir_isotig20625 | |||||||||
| MI00932 | |||||||||
| Tcol_isotig14611 | |||||||||
| FC820751.1 | |||||||||
| CR12284 | |||||||||
| MIC00172_1 | |||||||||
| CRC00820_1 | |||||||||
| Associated_feature | WBsf659133 | ||||||||
| WBsf659134 | |||||||||
| WBsf225176 | |||||||||
| WBsf225177 | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Expr1014259 | ||||||||
| Expr1030180 | |||||||||
| Expr1152591 | |||||||||
| Expr2009691 | |||||||||
| Expr2027930 | |||||||||
| Drives_construct | WBCnstr00037611 | ||||||||
| Construct_product | WBCnstr00037611 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (287) | |||||||||
| Map_info | Map | III | Position | -0.893219 | Error | 0.003987 | |||
| Positive | Positive_clone | F57B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4172 | |||||||
| 4970 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004588 | ||||||||
| WBPaper00010803 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | The allele gl5 has been renamed to vr5 as the "l" causes ambiguity | CGC_data_submission | |||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
