WormBase Tree Display for Gene: WBGene00000276

WBGene00000276 Evidence: Person_evidence: WBPerson2290
  SMap: S_parent: Sequence: F57B9
  Identity: Version: 1
    Name: CGC_name: byn-1 Person_evidence: WBPerson2290
      Sequence_name: F57B9.5
      Molecular_name: F57B9.5
        F57B9.5.1
        CE25013
      Other_name: CELE_F57B9.5 Accession_evidence: NDB BX284603
      Public_name: byn-1
    DB_info: Database: AceView gene 3I25
        WormQTL gene WBGene00000276
        WormFlux gene WBGene00000276
        NDB locus_tag CELE_F57B9.5
        Panther gene CAEEL|WormBase=WBGene00000276|UniProtKB=Q20932
          family PTHR12821
        NCBI gene 175968
        RefSeq protein NM_066109.6
        SwissProt UniProtAcc Q20932
        TREEFAM TREEFAM_ID TF312968
        UniProt_GCRP UniProtAcc Q20932
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: byn
    Allele (58)
    RNASeq_FPKM (74)
    GO_annotation: 00069635
      00069636
      00069637
      00069638
      00069639
      00069640
    Contained_in_operon: CEOP3404
    Ortholog: WBGene00061635 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036401 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00150518 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138060 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00213599 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00224774 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6047 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2523 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1516 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17290 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g320 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20019 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5947 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g17527 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g132 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2992 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00417.g10561 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-byn-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14432 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00301.g9004 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18896 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009952 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11590 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g17494 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30249400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8033 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245620 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304330 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00261122 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00293208 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000451 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0010292 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1287 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:1157 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1858419 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:727959 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: byn-1 encodes a homolog of mammalian BYSTIN-LIKE (BYSL; OMIM:603871). Paper_evidence: WBPaper00004588
            WBPaper00012752
            WBPaper00013616
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable snoRNA binding activity. Predicted to be involved in rRNA processing. Predicted to be located in cytoplasm and nucleolus. Predicted to be part of preribosome, small subunit precursor. Is an ortholog of human BYSL (bystin like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F57B9.5
    Corresponding_transcript: F57B9.5.1
    Other_sequence (50)
    Associated_feature: WBsf659133
      WBsf659134
      WBsf225176
      WBsf225177
  Experimental_info: RNAi_result (25)
    Expr_pattern: Expr1014259
      Expr1030180
      Expr1152591
      Expr2009691
      Expr2027930
    Drives_construct: WBCnstr00037611
    Construct_product: WBCnstr00037611
    Microarray_results (21)
    Expression_cluster (135)
    Interaction (287)
  Map_info: Map: III Position: -0.893219 Error: 0.003987
    Positive: Positive_clone: F57B9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4172
        4970
    Pseudo_map_position
  Reference: WBPaper00004588
    WBPaper00010803
    WBPaper00038491
    WBPaper00055090
  Remark: The allele gl5 has been renamed to vr5 as the "l" causes ambiguity CGC_data_submission
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene