WormBase Tree Display for Gene: WBGene00000214
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| WBGene00000214 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y39B6A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | asp-1 | Person_evidence | WBPerson184 | |||||
| Sequence_name | Y39B6A.20 | ||||||||
| Molecular_name | Y39B6A.20 | ||||||||
| Y39B6A.20.1 | |||||||||
| CE21681 | |||||||||
| Other_name | Y39B6B.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y39B6A.20 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | asp-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asp | ||||||||
| Allele (35) | |||||||||
| Strain | WBStrain00001516 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (57) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | asp-1 encodes a homolog of cathepsin D aspartic protease; it is transcribed exclusively in intestinal cells of the late embryo and early larvae and is not observed in older larvae or adults; ASP-1 is dispensable for neuronal degeneration. | Paper_evidence | WBPaper00004299 | |||||
| WBPaper00005513 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Located in cytoplasm and external side of apical plasma membrane. Expressed in intestinal cell and intestine. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human PGC (progastricsin) and REN (renin). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | Y39B6A.20 | |||||||
| Corresponding_transcript | Y39B6A.20.1 | ||||||||
| Other_sequence (155) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00002373 | ||||||||
| WBCnstr00010076 | |||||||||
| WBCnstr00022452 | |||||||||
| WBCnstr00037658 | |||||||||
| Construct_product | WBCnstr00010076 | ||||||||
| WBCnstr00022452 | |||||||||
| WBCnstr00037658 | |||||||||
| Antibody | WBAntibody00000301 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (284) | |||||||||
| Interaction | WBInteraction000029754 | ||||||||
| WBInteraction000136795 | |||||||||
| WBInteraction000136876 | |||||||||
| WBInteraction000136885 | |||||||||
| WBInteraction000136904 | |||||||||
| WBInteraction000140859 | |||||||||
| WBInteraction000140874 | |||||||||
| WBInteraction000144237 | |||||||||
| WBInteraction000144254 | |||||||||
| WBInteraction000144261 | |||||||||
| WBInteraction000144267 | |||||||||
| WBInteraction000144275 | |||||||||
| WBInteraction000144277 | |||||||||
| WBInteraction000144282 | |||||||||
| WBInteraction000144288 | |||||||||
| WBInteraction000147218 | |||||||||
| WBInteraction000150146 | |||||||||
| WBInteraction000153187 | |||||||||
| WBInteraction000175501 | |||||||||
| WBInteraction000175509 | |||||||||
| WBInteraction000185261 | |||||||||
| WBInteraction000188291 | |||||||||
| WBInteraction000324317 | |||||||||
| WBInteraction000500989 | |||||||||
| WBInteraction000541211 | |||||||||
| WBInteraction000543506 | |||||||||
| WBInteraction000544354 | |||||||||
| WBInteraction000544420 | |||||||||
| WBInteraction000548551 | |||||||||
| WBInteraction000552361 | |||||||||
| WBInteraction000552710 | |||||||||
| WBInteraction000553432 | |||||||||
| WBInteraction000554977 | |||||||||
| WBInteraction000560525 | |||||||||
| WBInteraction000562232 | |||||||||
| WBInteraction000563557 | |||||||||
| WBInteraction000563655 | |||||||||
| WBInteraction000565291 | |||||||||
| WBInteraction000566920 | |||||||||
| WBInteraction000569336 | |||||||||
| WBInteraction000572227 | |||||||||
| WBInteraction000572682 | |||||||||
| WBInteraction000572935 | |||||||||
| WBInteraction000573358 | |||||||||
| WBInteraction000574525 | |||||||||
| WBInteraction000577486 | |||||||||
| WBInteraction000579715 | |||||||||
| WBInteraction000585995 | |||||||||
| WBInteraction000586334 | |||||||||
| WBProcess | WBbiopr:00000134 | ||||||||
| Map_info | Map | V | Position | 18.5005 | Error | 0.138896 | |||
| Positive | Positive_clone | Y39B6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Y39B6B | |||||||||
| Mapping_data | Multi_point | 4527 | |||||||
| 5346 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (31) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
