WormBase Tree Display for Gene: WBGene00000198
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| WBGene00000198 | SMap | S_parent | Sequence | C15F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | art-1 | Person_evidence | WBPerson349 | |||||
| Sequence_name | C15F1.6 | ||||||||
| Molecular_name | C15F1.6 | ||||||||
| C15F1.6.1 | |||||||||
| CE20509 | |||||||||
| Other_name | CELE_C15F1.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | art-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | art | ||||||||
| Allele (28) | |||||||||
| Legacy_information | [C.elegansII] NMK. art for Alpha steroid ReducTase related; art-1 has significant similarity to rat SC2 gene. Downstream gene in operon with sod-1. [Kuwabara & Shah 1994; PK] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP2272 | ||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00014241 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00008959 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009635 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | a protein similar to synaptic glycoprotein SC2 from mammals. | Curator_confirmed | WBPerson480 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity. Predicted to be involved in very long-chain fatty acid biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 14 and catecholaminergic polymorphic ventricular tachycardia 3. Is an ortholog of human TECR (trans-2,3-enoyl-CoA reductase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081188 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4551) | ||||
| DOID:0060677 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:27365) | ||||||
| Molecular_info | Corresponding_CDS | C15F1.6 | |||||||
| Corresponding_transcript | C15F1.6.1 | ||||||||
| Other_sequence (133) | |||||||||
| Associated_feature | WBsf223270 | ||||||||
| WBsf223271 | |||||||||
| WBsf223272 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010793 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076129 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028922 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040613 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015455 | ||||||||
| Expr1030117 | |||||||||
| Expr1144668 | |||||||||
| Expr2009433 | |||||||||
| Expr2027670 | |||||||||
| Drives_construct | WBCnstr00037670 | ||||||||
| Construct_product | WBCnstr00037670 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | II | Position | 0.201218 | Error | 0.000976 | |||
| Positive | Positive_clone | C15F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| ZK513 | Author_evidence | Kuwabara PE | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002071 | ||||||||
| WBPaper00026692 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059947 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00062388 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
