WormBase Tree Display for Gene: WBGene00000190
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WBGene00000190 | SMap | S_parent | Sequence | F45E4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | warf | ||||||
Allele (19) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (54) | |||||||
Paralog (15) | |||||||
Structured_description | Automated_description | Predicted to enable GTP binding activity and GTPase activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F45E4.1 | |||||
Corresponding_transcript | F45E4.1.1 | ||||||
Other_sequence | CJC17359_1 | ||||||
Oden_isotig24491 | |||||||
Acan_isotig13284 | |||||||
Oden_isotig05273 | |||||||
Oden_isotig05276 | |||||||
Associated_feature | WBsf228559 | ||||||
Experimental_info | RNAi_result (14) | ||||||
Expr_pattern | Expr1014825 | ||||||
Expr1151246 | |||||||
Expr2009390 | |||||||
Expr2027626 | |||||||
Drives_construct | WBCnstr00037674 | ||||||
Construct_product | WBCnstr00037674 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (295) | |||||||
Interaction (13) | |||||||
WBProcess | WBbiopr:00000120 | ||||||
Map_info | Map | IV | Position | 3.36784 | Error | 0.000898 | |
Positive | Positive_clone | F45E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (15) | |||||||
Remark | This gene was previously known as the CGC approved name arl-6. arl-6 has now been re-assigned to WBGene000193. | Curator_confirmed | WBPerson2970 | ||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |