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WormBase Tree Display for Gene: WBGene00000190

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Name Class

WBGene00000190SMapS_parentSequenceF45E4
IdentityVersion3
NameCGC_namewarf-1Laboratory_evidenceGNW
Sequence_nameF45E4.1
Molecular_nameF45E4.1
F45E4.1.1
CE10492
Other_namearl-6CGC_data_submission
arf-1.1
CELE_F45E4.1Accession_evidenceNDBBX284604
Public_namewarf-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
205 Nov 2004 15:32:14WBPerson2970Name_changeCGC_namearf-1.1
310 Sep 2020 13:38:11WBPerson1983Name_changeCGC_namewarf-1
Other_namearf-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classwarf
Allele (19)
RNASeq_FPKM (74)
GO_annotation (15)
OrthologWBGene00028284Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00156938Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00062463Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00113750Pristionchus pacificusFrom_analysisOMA
WBGene00121368Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00142370Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00164232Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151621Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00192053Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00124832Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00061329Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00231240Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10857Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8681Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13627Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g16171Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15094Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g17272Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6310Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14803Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g14805Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g8043Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16173Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16175Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20393Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9761Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1385Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00369.g9881Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00870.g14659Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-arf-1.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13854Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g13855Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21220Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00007.g542Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12895Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013984Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13547Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14542Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14770Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15553Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2401Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40304600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10881Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00164978Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00241929Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00090839Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109145Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115595Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00277913Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257677Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265637Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285761Trichuris murisFrom_analysisWormBase-Compara
WBGene00290336Trichuris murisFrom_analysisWormBase-Compara
WBGene00293949Trichuris murisFrom_analysisWormBase-Compara
Paralog (15)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF45E4.1
Corresponding_transcriptF45E4.1.1
Other_sequenceCJC17359_1
Oden_isotig24491
Acan_isotig13284
Oden_isotig05273
Oden_isotig05276
Associated_featureWBsf228559
Experimental_infoRNAi_result (14)
Expr_patternExpr1014825
Expr1151246
Expr2009390
Expr2027626
Drives_constructWBCnstr00037674
Construct_productWBCnstr00037674
Microarray_results (21)
Expression_cluster (295)
Interaction (13)
WBProcessWBbiopr:00000120
Map_infoMapIVPosition3.36784Error0.000898
PositivePositive_cloneF45E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (15)
RemarkThis gene was previously known as the CGC approved name arl-6. arl-6 has now been re-assigned to WBGene000193.Curator_confirmedWBPerson2970
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene