WormBase Tree Display for Gene: WBGene00000186
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| WBGene00000186 | SMap | S_parent | Sequence | C01C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ark-1 | Person_evidence | WBPerson625 | |||||
| Sequence_name | C01C7.1 | ||||||||
| Molecular_name | C01C7.1a | ||||||||
| C01C7.1a.1 | |||||||||
| CE26967 | |||||||||
| C01C7.1b | |||||||||
| CE43742 | |||||||||
| C01C7.1b.1 | |||||||||
| Other_name | rok-1 | ||||||||
| CELE_C01C7.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | ark-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ark | ||||||||
| Allele (153) | |||||||||
| Legacy_information | negatively regulates vulval differentiation [PS] | ||||||||
| [C.elegansII] sy187 : negatively regulates vulval differentiation;20C no phenotype alone, 25C some excess vulval differentiation; more in sli-1(sy243) background. [PS] | |||||||||
| Strain | WBStrain00027395 | ||||||||
| WBStrain00030839 | |||||||||
| WBStrain00030876 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (28) | |||||||||
| Ortholog (34) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Concise_description | ark-1 encodes a homolog of the nonreceptor tyrosine kinase ACK which inhibits signalling through the EGF receptor homolog LET-23, both in (RAS-dependent) vulval development and in (RAS-independent) ovulation. | Paper_evidence | WBPaper00004273 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein tyrosine kinase activity. Involved in embryo development; negative regulation of epidermal growth factor receptor signaling pathway; and negative regulation of vulval development. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01C7.1a | |||||||
| C01C7.1b | |||||||||
| Corresponding_CDS_history | C01C7.1:wp46 | ||||||||
| Corresponding_transcript | C01C7.1a.1 | ||||||||
| C01C7.1b.1 | |||||||||
| Other_sequence (41) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00085936 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085934 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039297 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085935 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085932 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085933 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092169 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019576 | ||||||||
| Expr1030109 | |||||||||
| Expr1143415 | |||||||||
| Expr2009398 | |||||||||
| Expr2027634 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (72) | |||||||||
| WBProcess | WBbiopr:00000071 | ||||||||
| Map_info | Map | IV | Position | 6.12267 | Error | 0.004541 | |||
| Positive | Positive_clone | C01C7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4162 | |||||||
| 4444 | |||||||||
| 5595 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (36) | |||||||||
| Remark | near unc-31 | ||||||||
| on chromosome IV | |||||||||
| rok-1 was merged into this gene by krb on advice of JAH 25/02/02 | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
