WormBase Tree Display for Gene: WBGene00000181
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| WBGene00000181 | SMap | S_parent | Sequence | F01G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ard-1 | |||||||
| Sequence_name | F01G4.2 | ||||||||
| Molecular_name | F01G4.2a | ||||||||
| F01G4.2a.1 | |||||||||
| CE03127 | |||||||||
| F01G4.2b | |||||||||
| CE49748 | |||||||||
| F01G4.2b.1 | |||||||||
| Other_name | CELE_F01G4.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ard-1 | ||||||||
| DB_info | Database | AceView | gene | 4L897 | |||||
| WormQTL | gene | WBGene00000181 | |||||||
| WormFlux | gene | WBGene00000181 | |||||||
| NDB | locus_tag | CELE_F01G4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000181|UniProtKB=Q19102 | |||||||
| family | PTHR43658 | ||||||||
| NCBI | gene | 178016 | |||||||
| RefSeq | protein | NM_001307064.3 | |||||||
| NM_069682.8 | |||||||||
| TrEMBL | UniProtAcc | Q19102 | |||||||
| A0A061AD09 | |||||||||
| UniProt_GCRP | UniProtAcc | Q19102 | |||||||
| OMIM | gene | 300256 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ard | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00049398 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00000186 | ||||||||
| 00000187 | |||||||||
| 00000188 | |||||||||
| 00000189 | |||||||||
| 00000190 | |||||||||
| 00000191 | |||||||||
| Contained_in_operon | CEOP4412 | ||||||||
| Ortholog (44) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Concise_description | ard-1 encodes a homolog of mammalian 3-hydroxyacyl-CoA dehydrogenase (HADH II)/amyloid-beta binding alcohol dehydrogenase (ABAD) that is predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| WBPaper00012828 | |||||||||
| WBPaper00013599 | |||||||||
| WBPaper00013615 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable estradiol 17-beta-dehydrogenase [NAD(P)] activity. Predicted to be involved in androgen metabolic process; estrogen metabolic process; and fatty acid metabolic process. Predicted to be located in mitochondrion. Expressed in hypodermis. Human ortholog(s) of this gene implicated in Alzheimer's disease; osteosarcoma; pheochromocytoma; and syndromic X-linked intellectual disability type 10. Is an ortholog of human HSD17B10 (hydroxysteroid 17-beta dehydrogenase 10). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||
| DOID:3347 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||||
| DOID:0060810 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||||
| DOID:0050771 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||||
| Molecular_info | Corresponding_CDS | F01G4.2a | |||||||
| F01G4.2b | |||||||||
| Corresponding_transcript | F01G4.2a.1 | ||||||||
| F01G4.2b.1 | |||||||||
| Other_sequence (74) | |||||||||
| Associated_feature | WBsf997771 | ||||||||
| WBsf997772 | |||||||||
| WBsf1018176 | |||||||||
| WBsf229103 | |||||||||
| WBsf229104 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00025001 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027256 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043779 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076269 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012757 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102583 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030558 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102692 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102683 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00102674 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8141 | ||||||||
| Expr12157 | |||||||||
| Expr1024424 | |||||||||
| Expr1030105 | |||||||||
| Expr1147756 | |||||||||
| Expr2009389 | |||||||||
| Expr2027625 | |||||||||
| Drives_construct | WBCnstr00013141 | ||||||||
| WBCnstr00020295 | |||||||||
| WBCnstr00037681 | |||||||||
| Construct_product | WBCnstr00037681 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction (60) | |||||||||
| Map_info | Map | IV | Position | 4.90778 | |||||
| Positive | Positive_clone | F01G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026640 | ||||||||
| WBPaper00026800 | |||||||||
| WBPaper00028352 | |||||||||
| WBPaper00031915 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062444 | |||||||||
| WBPaper00062625 | |||||||||
| Remark | The name sad was previously used for this Short-chain Alcohol Dehydrogenase ERAB family by Carl Johnson. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
