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WormBase Tree Display for Gene: WBGene00000114

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Name Class

WBGene00000114SMapS_parentSequenceF13D12
IdentityVersion1
NameCGC_namealh-8Person_evidenceWBPerson651
Sequence_nameF13D12.4
Molecular_nameF13D12.4a
F13D12.4a.1
CE02183
F13D12.4b
CE36262
F13D12.4b.1
Other_nameCELE_F13D12.4Accession_evidenceNDBBX284602
Public_namealh-8
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classalh
Allele (41)
StrainWBStrain00040157
WBStrain00051090
RNASeq_FPKM (74)
GO_annotation (20)
OrthologWBGene00053342Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00026057Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00150463Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00108100Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00126458Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00148835Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g6403Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11461Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4610Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17031Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21804Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16857Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9447Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5396Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18863Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g16042Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00068.g3297Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_07035.g20646Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10576.g22729Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_29445.g27744Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-alh-8Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold458.g1413Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00086.g3842Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09353Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005567Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02114Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22084Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20312810Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6022Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262395Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262964Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0023537Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-9192Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:7179Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1915077Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:621556Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (11)
Structured_descriptionConcise_descriptionalh-8 is orthologous to the human gene METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE (ALDH6A1; OMIM:603178), which when mutated leads to MMSDH deficiency.Curator_confirmedWBPerson1823
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable malonate-semialdehyde dehydrogenase (acetylating) activity and methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity. Predicted to be involved in thymine catabolic process and valine catabolic process. Located in mitochondrion. Is an ortholog of human ALDH6A1 (aldehyde dehydrogenase 6 family member A1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF13D12.4a
F13D12.4b
Corresponding_transcriptF13D12.4a.1
F13D12.4b.1
Other_sequence (168)
Associated_featureWBsf644715
WBsf644716
WBsf658271
WBsf658272
WBsf981293
WBsf989871
WBsf222186
WBsf222187
WBsf222188
WBsf222189
Experimental_infoRNAi_resultWBRNAi00044501Inferred_automaticallyRNAi_primary
WBRNAi00030884Inferred_automaticallyRNAi_primary
WBRNAi00013215Inferred_automaticallyRNAi_primary
WBRNAi00097981Inferred_automaticallyRNAi_primary
Expr_patternExpr9518
Expr1024671
Expr1030061
Expr1148451
Expr2009310
Expr2027546
Drives_constructWBCnstr00037722
Construct_productWBCnstr00014083
WBCnstr00037722
Microarray_results (45)
Expression_cluster (183)
SAGE_tagSAGE:aagaagctcgStrandSense
Unambiguously_mapped
SAGE:tctctcttgaStrandAntisense
SAGE:ttcaaacttcStrandSense
Unambiguously_mapped
SAGE:cattgttgacgggtcagStrandAntisense
Interaction (76)
Map_infoMapIIPosition4.01627Error0.005159
PositivePositive_cloneF13D12Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038444
WBPaper00038491
WBPaper00042257
WBPaper00049812
WBPaper00049828
WBPaper00055090
WBPaper00064263
WBPaper00065140
WBPaper00065288
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene