WormBase Tree Display for CDS: T27E4.3
expand all nodes | collapse all nodes | view schema
| T27E4.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T27E4 | |||
| Structure | Source_exons | 1 | 138 | |||
| 194 | 487 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P02513 | ||
| UniProt | UniProtAcc | P02513 | ||||
| UniProt_GCRP | UniProtAcc | P02513 | ||||
| AlphaFold | entry | P02513 | ||||
| NCBI_protein | GI_number | GI:351058245 | ||||
| Protein_id | CHROMOSOME_V | CCD65663 | 1 | |||
| DB_remark | HSP-16.48 protein; contains similarity to Pfam domain PF00011 (Hsp20/alpha crystallin family); contains similarity to Interpro domains IPR002068 (Alpha crystallin/Hsp20 domain), IPR008978 (HSP20-like chaperone), IPR001436 (Alpha crystallin/Small heat shock protein, animal type) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00002019 | ||||
| Corresponding_transcript | T27E4.3.1 | |||||
| Corresponding_protein | CE14251 | |||||
| Corresponding_PCR_product | mv_AAA28067 | |||||
| mv_AAA28069 | ||||||
| sjj_T27E4.3 | ||||||
| Corresponding_oligo_set (16) | ||||||
| RNAi_result | WBRNAi00093732 | |||||
| WBRNAi00063167 | ||||||
| WBRNAi00106385 | ||||||
| WBRNAi00106384 | ||||||
| WBRNAi00027602 | ||||||
| Microarray_results | SMD_T27E4.3 | |||||
| 172901_x_at | ||||||
| A_12_P105214 | ||||||
| GPL13394_WBGene00002019 | ||||||
| GPL13914_T27E4.3 | ||||||
| GPL14144_T27E4.3_143-202_0.718_28_B | ||||||
| GPL14144_T27E4.3_299-358_0.766_19_C | ||||||
| GPL14144_T27E4.3_365-424_0.816_12_A | ||||||
| GPL19516_CGZ0037154 | ||||||
| GPL21109_T27E4.9 | ||||||
| GPL3518_CE14251 | ||||||
| GPL8304_CE_WBGene00002019_A | ||||||
| GPL8304_CE_WBGene00002020_A | ||||||
| GPL8304_CE_WBGene00002020_C | ||||||
| GPL8673_T27E4_3P00066 | ||||||
| GPL8673_T27E4_3P00121 | ||||||
| GPL8673_T27E4_3P00138 | ||||||
| GPL8673_T27E4_9P00066 | ||||||
| GPL8673_T27E4_9P00121 | ||||||
| GPL8673_T27E4_9P00138 | ||||||
| GPL9450_T27E4.9_102 | ||||||
| Brief_identification | Heat shock protein Hsp-16.48/Hsp-16.49 | Accession_evidence | UniProt | SP:P02513 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
