WormBase Tree Display for CDS: T23H2.2
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| T23H2.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T23H2 | |||
| Structure | Source_exons | 1 | 43 | |||
| 1753 | 1871 | |||||
| 2420 | 2563 | |||||
| 2752 | 3051 | |||||
| 3094 | 3188 | |||||
| 3483 | 3637 | |||||
| 3750 | 3907 | |||||
| 4616 | 4747 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | P91493 | ||
| UniProt | UniProtAcc | P91493 | ||||
| UniProt_GCRP | UniProtAcc | P91493 | ||||
| AlphaFold | entry | P91493 | ||||
| NCBI_protein | GI_number | GI:351062739 | ||||
| Protein_id | CHROMOSOME_I | CCD70771 | 1 | |||
| DB_remark | SNT-4 protein; contains similarity to Pfam domain PF00168 (C2 domain); contains similarity to Interpro domains IPR035892 (C2 domain superfamily), IPR000008 (C2 domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00004924 | ||||
| Corresponding_transcript | T23H2.2.1 | |||||
| Corresponding_protein | CE30456 | |||||
| Corresponding_PCR_product | cenix:76-g5 | |||||
| mv_T23H2.2 | ||||||
| sjj_T23H2.2 | ||||||
| Corresponding_oligo_set (16) | ||||||
| Matching_cDNA (48) | ||||||
| RNAi_result | WBRNAi00004292 | |||||
| WBRNAi00112397 | ||||||
| WBRNAi00094904 | ||||||
| WBRNAi00035895 | ||||||
| WBRNAi00001274 | ||||||
| WBRNAi00053987 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | C2 domain-containing protein | Accession_evidence | UniProt | TR:P91493 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 25 Mar 2002 00:00:00 | WBPerson615 | ||||
| Remark | [020325 js] removed the first exon and added a new one based on EST data - | Curator_confirmed | WBPerson615 | |||
| Method | curated |
