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WormBase Tree Display for CDS: T15B7.4

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Name Class

T15B7.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceT15B7
StructureSource_exons1796
8461027
DB_infoDatabaseTrEMBLUniProtAccO17036
UniProtUniProtAccO17036
UniProt_GCRPUniProtAccO17036
AlphaFoldentryO17036
NCBI_proteinGI_numberGI:373254199
TREEFAMTREEFAM_IDTF316783
Protein_idCHROMOSOME_VCCD681581
DB_remarkCOL-142 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
VisibleGeneWBGene00000715
Corresponding_transcriptT15B7.4.1
Corresponding_proteinCE13654
Corresponding_PCR_productcenix:212-f5
mv_T15B7.4
sjj_T15B7.4
Corresponding_oligo_set (14)
Matching_cDNA (29)
RNAi_resultWBRNAi00035590
WBRNAi00018741
WBRNAi00103532
WBRNAi00053365
WBRNAi00053366
Microarray_results (16)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:O17036
RNASeq_FPKM (74)
Methodcurated