WormBase Tree Display for CDS: T12D8.4
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T12D8.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T12D8 | |||
Structure | Source_exons | 1 | 81 | |||
474 | 564 | |||||
613 | 746 | |||||
891 | 1061 | |||||
1479 | 1615 | |||||
1661 | 1913 | |||||
2539 | 2709 | |||||
2754 | 2896 | |||||
3498 | 3597 | |||||
DB_info | Database | SwissProt | UniProtAcc | O45782 | ||
UniProt | UniProtAcc | O45782 | ||||
UniProt_GCRP | UniProtAcc | O45782 | ||||
AlphaFold | entry | O45782 | ||||
NCBI_protein | GI_number | GI:30145719 | ||||
Protein_id | CHROMOSOME_III | CAB03344 | 2 | |||
DB_remark | ARRD-17 protein; contains similarity to Pfam domains PF00339 (Arrestin (or S-antigen), N-terminal domain), PF02752 (Arrestin (or S-antigen), C-terminal domain); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR011022 (Arrestin C-terminal-like domain), IPR014752 (Arrestin-like, C-terminal), IPR011021 (Arrestin-like, N-terminal) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00011732 | ||||
Corresponding_transcript | T12D8.4.1 | |||||
Corresponding_protein | CE33831 | |||||
Corresponding_PCR_product | TH:324H12 | |||||
cenix:324-h12 | ||||||
mv_T12D8.4 | ||||||
sjj2_T12D8.4 | ||||||
sjj_T12D8.4 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (41) | ||||||
RNAi_result | WBRNAi00006335 | |||||
WBRNAi00035509 | ||||||
WBRNAi00053203 | ||||||
Microarray_results (20) | ||||||
Brief_identification | Arrestin domain-containing protein 17 | Accession_evidence | UniProt | SP:O45782 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 08 Apr 2003 00:00:00 | WBPerson1983 | ||||
Remark | [030408 pad] gene model extended 3' to include a 9th exon on basis of ESTs yk864b05.3 etc. | Curator_confirmed | WBPerson1983 | |||
Associated_feature | WBsf000512 | |||||
Method | curated |