WormBase Tree Display for CDS: T12B5.10
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| T12B5.10 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T12B5 | |||
| Structure | Source_exons | 1 | 227 | |||
| 530 | 1148 | |||||
| 1191 | 1406 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q9TZ26 | ||
| UniProt | UniProtAcc | Q9TZ26 | ||||
| UniProt_GCRP | UniProtAcc | Q9TZ26 | ||||
| AlphaFold | entry | Q9TZ26 | ||||
| NCBI_protein | GI_number | GI:351064778 | ||||
| TREEFAM | TREEFAM_ID | TF322360 | ||||
| Protein_id | CHROMOSOME_III | CCD73259 | 1 | |||
| DB_remark | FBXA-60 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00020456 | ||||
| Corresponding_transcript | T12B5.10.1 | |||||
| Corresponding_protein | CE20067 | |||||
| Corresponding_PCR_product | TH:328E4 | |||||
| cenix:328-e4 | ||||||
| mv_T12B5.10 | ||||||
| sjj_T12B5.10 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (29) | ||||||
| RNAi_result | WBRNAi00018634 | |||||
| WBRNAi00053179 | ||||||
| WBRNAi00006629 | ||||||
| WBRNAi00018627 | ||||||
| WBRNAi00035500 | ||||||
| Microarray_results | SMD_T12B5.10 | |||||
| 172594_x_at | ||||||
| A_12_P120007 | ||||||
| Aff_T12B5.10 | ||||||
| GPL13394_WBGene00020456 | ||||||
| GPL13914_T12B5.10 | ||||||
| GPL19516_CGZ0006646 | ||||||
| GPL19516_CGZ0034806 | ||||||
| GPL21109_C29F9.11 | ||||||
| GPL21109_T12B5.10 | ||||||
| GPL3518_CE20067 | ||||||
| GPL8304_CE_WBGene00020456_A | ||||||
| GPL8673_T12B5_10P00069 | ||||||
| GPL8673_T12B5_10P00071 | ||||||
| GPL8673_T12B5_10P00079 | ||||||
| GPL9450_T12B5.10 | ||||||
| cea2.3.23814 | ||||||
| cea2.p.158287 | ||||||
| Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:Q9TZ26 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
