WormBase Tree Display for CDS: T04A11.6
expand all nodes | collapse all nodes | view schema
T04A11.6 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | T04A11 | ||
Structure | Source_exons (13) | ||||
DB_info | Database | KEGG | KEGG_id | 5.6.2.4 | |
SwissProt | UniProtAcc | O18017 | |||
UniProt | UniProtAcc | O18017 | |||
UniProt_GCRP | UniProtAcc | O18017 | |||
AlphaFold | entry | O18017 | |||
NCBI_protein | GI_number | GI:22859109 | |||
TREEFAM | TREEFAM_ID | TF317801 | |||
Protein_id | CHROMOSOME_IV | CAB05609 | 2 | ||
DB_remark | HIM-6 protein; contains similarity to Pfam domains PF00270 (DEAD/DEAH box helicase), PF00271 (Helicase conserved C-terminal domain), PF00570 (HRDC domain), PF09382 (RQC domain), PF16124 (RecQ zinc-binding); contains similarity to Interpro domains IPR011545 (DEAD/DEAH box helicase domain), IPR044876 (HRDC domain superfamily), IPR010997 (HRDC-like superfamily), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001650 (Helicase, C-terminal domain-like), IPR002121 (HRDC domain), IPR032284 (ATP-dependent DNA helicase RecQ, zinc-binding domain), IPR036390 (Winged helix DNA-binding domain superfamily), IPR004589 (DNA helicase, ATP-dependent, RecQ type), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR018982 (RQC domain), IPR014001 (Helicase superfamily 1/2, ATP-binding domain) | ||||
Origin | From_laboratory | HX | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible (12) | |||||
Associated_feature | WBsf000191 | ||||
Method | curated |