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WormBase Tree Display for Sequence: T01D3

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Name Class

T01D3DNAT01D328416
SMapS_childGene_childWBGene001698171965119631
WBGene000113281271119531
WBGene000113292371321430
WBGene000059871980021459
WBGene001982311253312586
WBGene000113271583514407
CDS_childT01D3.21579514426
T01D3.2:wp761567914426
T01D3.3a1387519403
T01D3.3b1353419403
T01D3.3b:wp1761387519403
T01D3.3c1353419403
T01D3.4:wp2521980021611
T01D3.4a1980021457
T01D3.52371021719
T01D3.7:wp189117311683
T01D3.7:wp230117311683
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g107n11_x28_V_p7081634
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g178_x28_V_p1045810550
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g159_x28_V_p1872119019
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g40_x28_V_p2688926978
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g182_x28_V_p1737517509
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g222_x28_V_p53995494
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g240_x28_V_p1671316796
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g151_x28_V_p1809818267
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g10n11_x28_V_m2371021722
RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g166_x28_V_p1683617046
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g233_x28_V_p2809328155
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g142_x28_V_p1030710408
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g185_x28_V_p53395398
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g36n11m1_x28_V_p1623816403
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g107_x28_V_p1599016406
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g146_x28_V_p89389015
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g37n11m1_x28_V_p1418314338
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g19n11m1_x28_V_p1387514094
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g36n11_x28_V_p1598216087
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g216_x28_V_p94829581
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g140_x28_V_p967910157
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g149_x28_V_p54955722
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g37n11_x28_V_p1418314265
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g19n11_x28_V_p1353419400
RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g27n11_x28_V_m2371021722
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g33n11_x28_V_m2371021722
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g212_x28_V_p2638926497
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g172_x28_V_p2541125791
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g180_x28_V_p53875620
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g126_x28_V_p2683127124
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g45n11s1k107_x28_V_p1387514094
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g128_x28_V_p967911656
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g150_x28_V_p1599016085
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g205_x28_V_p89389153
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g208_x28_V_p1645316605
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g45n11_x28_V_p1353419400
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g156_x28_V_p2580126001
RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g238_x28_V_p20842149
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g51_x28_V_p1400717437
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g100_x28_V_p1355813988
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g26n11_x28_V_m2371021722
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g156_x28_V_p1917919400
RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g18_x28_V_p2688926978
RNASEQ_embryo_him-8_20dC_post-L1_g92_x28_V_p708782
RNASEQ_embryo_him-8_20dC_post-L1_g106_x28_V_p1598216645
RNASEQ_embryo_him-8_20dC_post-L1_g105_x28_V_p1400719400
RNASEQ_embryo_him-8_20dC_post-L1_g80_x28_V_p217440
RNASEQ_embryo_him-8_20dC_post-L1_g151_x28_V_p66956757
RNASEQ_embryo_him-8_20dC_post-L1_g114_x28_V_p55885695
RNASEQ_embryo_him-8_20dC_post-L1_g6n11_x28_V_m2371021722
RNASEQ_embryo_him-8_20dC_post-L1_g62_x28_V_p1418314338
RNASEQ_embryo_him-8_20dC_post-L1_g118_x28_V_p97039783
RNASEQ_embryo_him-8_20dC_post-L1_g104_x28_V_p89389030
RNASEQ_embryo_him-8_20dC_post-L1_g103_x28_V_p986110393
RNASEQ_embryo_him-8_20dC_post-L1_g181_x28_V_p45174576
RNASEQ_embryo_him-8_20dC_post-L1_g137_x28_V_p1059511605
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g38n11_x28_V_m2371021722
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g130_x28_V_p1693017353
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g220_x28_V_p1393913992
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g89_x28_V_p2688927014
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g39_x28_V_m2379623615
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g145_x28_V_p89389102
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g176_x28_V_p1036410522
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g147_x28_V_p96799783
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g14e6k62_x28_V_p2688927038
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g207_x28_V_p1671316823
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g186_x28_V_p1813118285
RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g200_x28_V_p45174621
RNASEQ_L4_soma_JK1107_no_DNaseI_g166_x28_V_p1400716835
RNASEQ_L4_soma_JK1107_no_DNaseI_g43n11_x28_V_m2371021722
RNASEQ_L4_soma_JK1107_no_DNaseI_g189_x28_V_p1037610483
RNASEQ_L4_soma_JK1107_no_DNaseI_g139_x28_V_p390785
RNASEQ_L4_soma_JK1107_no_DNaseI_g186_x28_V_p1813318272
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g11n11s2k247_x28_V_p1671316836
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g92_x28_V_p2712228027
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g138_x28_V_p31863720
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g152_x28_V_m1533214789
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g74n11_x28_V_p7081808
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g125_x28_V_p58616214
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g128_x28_V_p80519198
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g202_x28_V_p49645242
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g120_x28_V_p929511680
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g11n11_x28_V_p1353419400
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g60n11_x28_V_m2371021722
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g161_x28_V_p38634159
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g11n11s1k129_x28_V_p1387514094
RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g11n11e2k244_x28_V_p1393914159
RNASEQ_early_embryo_g44n11e6k357_x28_V_p708785
RNASEQ_early_embryo_g115_x28_V_m1533214531
RNASEQ_early_embryo_g17n11_x28_V_m2371021722
RNASEQ_early_embryo_g204_x28_V_p185611680
RNASEQ_early_embryo_g57n11_x28_V_p1353419400
RNASEQ_early_embryo_g54_x28_V_p2530928027
RNASEQ_early_embryo_g76n11s2k247_x28_V_p1671316836
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11e6k368_x28_V_p708785
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g22n11m2_x28_V_p1599016087
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g22n11_x28_V_p1353419400
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g43n11s2k273_x28_V_p1671316836
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g103_x28_V_m1559514429
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g37_x28_V_p2530928027
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g22n11m1_x28_V_p1387514094
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g29n11_x28_V_m2371021722
RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g43n11e2k253_x28_V_p1393914159
RNASEQ_mid-L1_20dC_4hrs_post-L1_g174_x28_V_p1599016040
RNASEQ_mid-L1_20dC_4hrs_post-L1_g167_x28_V_p1645316512
RNASEQ_mid-L1_20dC_4hrs_post-L1_g61_x28_V_p2530928027
RNASEQ_mid-L1_20dC_4hrs_post-L1_g145_x28_V_p49645446
RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n11_x28_V_p1353414328
RNASEQ_mid-L1_20dC_4hrs_post-L1_g154_x28_V_p23492576
RNASEQ_mid-L1_20dC_4hrs_post-L1_g123_x28_V_p852711656
RNASEQ_mid-L1_20dC_4hrs_post-L1_g152_x28_V_p17772003
RNASEQ_mid-L1_20dC_4hrs_post-L1_g161_x28_V_p45174633
RNASEQ_mid-L1_20dC_4hrs_post-L1_g139_x28_V_p58617276
RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n11s2k55_x28_V_p1599016087
RNASEQ_mid-L1_20dC_4hrs_post-L1_g183_x28_V_p1608616298
RNASEQ_mid-L1_20dC_4hrs_post-L1_g136_x28_V_p36494165
RNASEQ_mid-L1_20dC_4hrs_post-L1_g48_x28_V_m2371021722
RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n12_x28_V_p1418314325
RNASEQ_mid-L1_20dC_4hrs_post-L1_g45n11_x28_V_p1669619400
RNASEQ_mid-L1_20dC_4hrs_post-L1_g45n11s2k120_x28_V_p1671316836
RNASEQ_mid-L1_20dC_4hrs_post-L1_g40n11m1_x28_V_p1387516406
RNASEQ_mid-L2_25dC_14hrs_post-L1_g125_x28_V_p62696700
RNASEQ_mid-L2_25dC_14hrs_post-L1_g23_x28t1_V_p2530928027
RNASEQ_mid-L2_25dC_14hrs_post-L1_g100n11_x28_V_p1353419400
RNASEQ_mid-L2_25dC_14hrs_post-L1_g171_x28_V_p1599016037
RNASEQ_mid-L2_25dC_14hrs_post-L1_g53n11_x28_V_m2371021722
RNASEQ_mid-L2_25dC_14hrs_post-L1_g112_x28_V_p1030711656
RNASEQ_mid-L2_25dC_14hrs_post-L1_g159_x28_V_p91189583
RNASEQ_mid-L2_25dC_14hrs_post-L1_g128_x28_V_p35085182
RNASEQ_mid-L2_25dC_14hrs_post-L1_g137_x28_V_p67798721
RNASEQ_mid-L2_25dC_14hrs_post-L1_g144_x28_V_p53155398
RNASEQ_mid-L2_25dC_14hrs_post-L1_g197_x28_V_p58615959
RNASEQ_mid-L2_25dC_14hrs_post-L1_g44_x28_V_p7081640
RNASEQ_mid-L2_25dC_14hrs_post-L1_g132_x28_V_p96799938
RNASEQ_mid-L3_25dC_25hrs_post-L1_g44n11_x28_V_m2371021722
RNASEQ_mid-L3_25dC_25hrs_post-L1_g17_x28_V_p2688926978
RNASEQ_mid-L3_25dC_25hrs_post-L1_g68n11s1k274_x28_V_p1387516836
RNASEQ_mid-L3_25dC_25hrs_post-L1_g87_x28_V_p1353414094
RNASEQ_mid-L3_25dC_25hrs_post-L1_g197_x28_V_p1671319400
RNASEQ_mid-L3_25dC_25hrs_post-L1_g134_x28_V_p93889480
RNASEQ_mid-L3_25dC_25hrs_post-L1_g104_x28_V_p40674558
RNASEQ_mid-L3_25dC_25hrs_post-L1_g131_x28_V_p86148733
RNASEQ_mid-L3_25dC_25hrs_post-L1_g120_x28_V_p95439593
RNASEQ_mid-L4_25dC_36hrs_post-L1_g61_x28_V_m2365321722
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g144_x28_V_p1404014214
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g167_x28_V_p1634416509
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g68_x28_V_p2530928027
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g146_x28_V_p1033710408
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g230_x28_V_p390785
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g137_x28_V_p1662117112
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g177_x28_V_p94519574
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g24n11_x28_V_m2371021722
RNASEQ_Adult_Harposporium_exposed_2_24hrs_g176_x28_V_p1599016037
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g39_x28_V_p2688926978
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g196_x28_V_p85278592
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g130_x28_V_p1810418327
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g162_x28_V_p1623616530
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g136_x28_V_p94829661
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g235_x28_V_p22452347
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g103_x28_V_p1671317755
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g104_x28_V_p7471724
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g22n11_x28_V_m2371021722
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g185_x28_V_p1917019343
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g179_x28_V_p53605611
RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g121_x28_V_p98619941
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g112e7k54_x28_V_p2707428054
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g135_x28_V_p40224174
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g101_x28_V_p1030710471
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g87n11_x28_V_p1353419400
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g37n11_x28_V_m2371021722
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g6_x28_V_p2688926978
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g130_x28_V_p94829593
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g160_x28_V_p390785
RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g173_x28_V_p53455503
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g58n11s1k175_x28_V_p1387514094
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g58n11_x28_V_p1353419400
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g126_x28_V_p1030711605
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g59_x28_V_p2688926978
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g161_x28_V_p41124585
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g59e6k56_x28_V_p2688927032
RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g27n11_x28_V_m2371021722
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g184_x28_V_p1711917344
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g30n11_x28_V_m2371021722
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g53_x28_V_p2688926978
RNASEQ_Young_Adult_25dC_46hrs_post-L1_g155_x28_V_p1813418273
T01D3.gc119788
T01D3.gc2117311683
T01D3.gc31261214338
T01D3.gc41579514426
T01D3.gc51598219403
T01D3.gc61981221457
T01D3.gc72216621719
T01D3.gc82371022449
T01D3.gc92530928348
ContigV.elegans.jigsaw.3385.mRNA33852377921324
ContigV.elegans.jigsaw.3384.mRNA33841980021469
ContigV.elegans.jigsaw.3383.mRNA33831596019526
ContigV.elegans.jigsaw.3382.mRNA33821583914361
ContigV.elegans.jigsaw.3381.mRNA33811226114355
AG1201_T01D3.3.T81353414162
AG1201_T01D3.3.T61353414355
AG1201_T01D3.3.T11353419403
AG1201_T01D3.3.T41353419403
AG1201_T01D3.3.T71353419403
AG1201_T01D3.3.T91353419403
AG1201_T01D3.2.T11579514426
AG1201_T01D3.4.T21980021457
AG1201_T01D3.4.T11990920920
AG1201_T01D3.5.T22371021719
AG1201_T01D3.5.T52379621719
AG1201_RIT5P.1826.T12328223434
AG1201_RIT5P.1826.T22328223628
AG1201_T01D3.5.T12395423769
AG1201_RIT5M.1263.T22415323992
AG1201_RIT5M.1263.T12499924734
TranscriptT01D3.4b1980021459
T01D3.81965119631
T01D3.91253312586
T01D3.2.11583514407
T01D3.3a.11271119531
T01D3.3b.11346919529
T01D3.3c.11346919525
T01D3.4a.11980021457
T01D3.5.12371321430
Nongenomicyk273e122153423702
PCR_product (18)
Allele (397)
Oligo_setAff_T01D3.11108411683
Aff_T01D3.21533114426
Aff_T01D3.3A1857919402
Aff_T01D3.42051321610
Aff_T01D3.52300021718
Aff_T01D3.62800928727
Feature_object (165)
Feature_dataT01D3:Polysome128416
T01D3:TranscriptionallyActiveRegion128416
T01D3:ChIPSeqTF128416
T01D3:TRF128416
T01D3:Dust128416
T01D3:inverted128416
Homol_data (19)
StructureFromSourceCHROMOSOME_V
Overlap_rightF35E1228316
Overlap_leftF58G11
Clone_left_endT01D31
F35E1228316
Clone_right_endF58G117451
DB_infoDatabaseEMBLNDB_ACZ81110
NDB_SVZ81110.2
DB_remark[121025] Sequence correction: SNP 0 bases @ 25629
[121025] Sequence correction WBsf267807 : Insertion G1 bases from @ 15199
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorSteward CA
From_laboratoryHX
Date_directory960603
SpeciesCaenorhabditis elegans
StrainWBStrain00000001
VisibleCloneT01D3
PropertiesGenomic_canonical
ChecksumMD5db0a01fa8f3e62cbc3ff2d158d7f6cd3
StatusFinished03 Jun 1996 00:00:00
Submitted21 Oct 1996 00:00:00
Annotated17 Feb 1997 00:00:00
MapSequence-VEndsLeft7784
Right7813
Interpolated_map_positionV5.58448
Assembly_tagsFinished Left11
Clone left end14
2831628319F35E12
Clone right end74487451F58G11
Finished Right2841628416
annotation2431124321single read only in loop of inverted repeat
2432224335region within loop of inverted repeat. Covered by 2 reads, but data is not 100 %, although we feel that this sequence is correct.
MethodGenomic_canonical