WormBase Tree Display for CDS: R186.3
expand all nodes | collapse all nodes | view schema
| R186.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R186 | |||
| Structure | Source_exons | 1 | 93 | |||
| 137 | 239 | |||||
| 289 | 422 | |||||
| 474 | 584 | |||||
| 687 | 886 | |||||
| 933 | 1014 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q22013 | ||
| UniProt | UniProtAcc | Q22013 | ||||
| UniProt_GCRP | UniProtAcc | Q22013 | ||||
| AlphaFold | entry | Q22013 | ||||
| NCBI_protein | GI_number | GI:3879200 | ||||
| TREEFAM | TREEFAM_ID | TF106190 | ||||
| Protein_id | CHROMOSOME_V | CAB01443 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF09439 (Signal recognition particle receptor beta subunit); contains similarity to Interpro domains IPR019009 (Signal recognition particle receptor, beta subunit), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011306 | ||||
| Corresponding_transcript | R186.3.1 | |||||
| Corresponding_protein | CE12874 | |||||
| Corresponding_PCR_product | cenix:118-f11 | |||||
| mv_R186.3 | ||||||
| sjj_R186.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (60) | ||||||
| RNAi_result | WBRNAi00085838 | |||||
| WBRNAi00022431 | ||||||
| WBRNAi00110886 | ||||||
| WBRNAi00071585 | ||||||
| WBRNAi00034956 | ||||||
| WBRNAi00112155 | ||||||
| WBRNAi00071874 | ||||||
| WBRNAi00076622 | ||||||
| WBRNAi00052012 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Signal recognition particle receptor subunit beta | Accession_evidence | UniProt | TR:Q22013 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf006272 | |||||
| Method | curated |
