WormBase Tree Display for CDS: R12H7.2
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| R12H7.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R12H7 | |||
| Structure | Source_exons | 1 | 86 | |||
| 668 | 854 | |||||
| 901 | 1024 | |||||
| 1152 | 1394 | |||||
| 1606 | 2149 | |||||
| 2203 | 2353 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.4.23.- | ||
| SwissProt | UniProtAcc | Q21966 | ||||
| UniProt | UniProtAcc | Q21966 | ||||
| UniProt_GCRP | UniProtAcc | Q21966 | ||||
| AlphaFold | entry | Q21966 | ||||
| NCBI_protein | GI_number | GI:3879202 | ||||
| Protein_id | CHROMOSOME_X | CAA90633 | 1 | |||
| DB_remark | ASP-4 protein; contains similarity to Pfam domain PF00026 (Eukaryotic aspartyl protease); contains similarity to Interpro domains IPR001461 (Aspartic peptidase A1 family), IPR021109 (Aspartic peptidase domain superfamily), IPR033121 (Peptidase family A1 domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000217 | ||||
| Corresponding_transcript | R12H7.2.1 | |||||
| Corresponding_protein | CE03567 | |||||
| Corresponding_PCR_product | cenix:19-h2 | |||||
| mv_R12H7.2 | ||||||
| sjj_R12H7.2 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (240) | ||||||
| RNAi_result (22) | ||||||
| Microarray_results (20) | ||||||
| Brief_identification | Aspartic protease 4 | Accession_evidence | UniProt | SP:Q21966 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf979184 | |||||
| Method | curated |
