WormBase Tree Display for CDS: PPA17107a

PPA17107a Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrIV
  Structure: Source_exons (36)
  DB_info: Database: pristionchus.org cds gene-UMM-S233-10.36
    DB_remark: PPA-UNC-26 protein; contains similarity to Pfam domains PF02383 (SacI homology domain), PF03372 (Endonuclease/Exonuclease/phosphatase family), PF08952 (Domain of unknown function (DUF1866)); contains similarity to Interpro domains IPR002013 (SAC domain), IPR000300 (Inositol polyphosphate-related phosphatase), IPR005135 (Endonuclease/exonuclease/phosphatase), IPR015047 (Synaptojanin-1/2, RNA recognition motif), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR036691 (Endonuclease/exonuclease/phosphatase superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
    Isoform: Curator_confirmed: WBPerson4055
  Visible: Gene: WBGene00106661
    Corresponding_transcript: PPA17107a.1
    Corresponding_protein: PP75429
    Corresponding_oligo_set: GPL14372_Probes_19752
      GPL14372_Probes_19753
      GPL14372_Probes_19754
      GPL14372_Probes_19756
      GPL14372_Probes_71330
    Microarray_results: GPL14372_Probes_19752
      GPL14372_Probes_19753
      GPL14372_Probes_19754
      GPL14372_Probes_19756
      GPL14372_Probes_71330
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 19 Sep 2019 11:15:26 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMM-S233-10.36 Curator_confirmed: WBPerson4055
      [190919 mh6] This CDS has been updated based on the RNAseq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated