WormBase Tree Display for CDS: PPA06471
expand all nodes | collapse all nodes | view schema
PPA06471 | SMap | S_parent | Sequence | PPA_ChrV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (24) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S554-0.18 | ||
TREEFAM | TREEFAM_ID | TF105702 | ||||
DB_remark | PPA-FIGO-1 protein; contains similarity to Pfam domain PF02383 (SacI homology domain); contains similarity to Interpro domain IPR002013 (SAC domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00096025 | ||||
Corresponding_transcript | PPA06471.1 | |||||
Corresponding_protein | PP65954 | |||||
Corresponding_oligo_set | GPL14372_Probes_37358 | |||||
GPL14372_Probes_37359 | ||||||
Microarray_results | GPL14372_Probes_37358 | |||||
GPL14372_Probes_37359 | ||||||
RNASeq_FPKM | WBls:0000032 | 10.3832 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.06554 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S554-0.18 | Curator_confirmed | WBPerson4055 | |||
Method | curated |