WormBase Tree Display for CDS: OVOC8142
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| OVOC8142 | SMap | S_parent | Sequence | OVOC_OM3_73 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (11) | |||||
| DB_info | DB_remark | OVO-UNC-103 protein; contains similarity to Pfam domains PF00027 (Cyclic nucleotide-binding domain), PF00520 (Ion transport protein); contains similarity to Interpro domains IPR018490 (Cyclic nucleotide-binding domain superfamily), IPR000595 (Cyclic nucleotide-binding domain), IPR003938 (Potassium channel, voltage-dependent, EAG/ELK/ERG), IPR005821 (Ion transport domain), IPR030172 (), IPR014710 (RmlC-like jelly roll fold) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00244951 | ||||
| Corresponding_transcript | OVOC8142.1 | |||||
| Corresponding_protein | OVP01590 | |||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 14.415 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 23.4442 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
| 30.3739 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
| 8.86129 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 20.2874 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 27.0808 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
