WormBase Tree Display for CDS: OVOC5319
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OVOC5319 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM2_65 | |||
Structure | Source_exons (15) | |||||
DB_info | DB_remark | OVO-UNC-54 protein; contains similarity to Pfam domains PF00063 (Myosin head (motor domain)), PF01576 (Myosin tail), PF02736 (Myosin N-terminal SH3-like domain); contains similarity to Interpro domains IPR004009 (Myosin, N-terminal, SH3-like), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR002928 (Myosin tail), IPR027401 (), IPR008989 (Myosin S1 fragment, N-terminal), IPR036961 (Kinesin motor domain superfamily), IPR001609 (Myosin head, motor domain) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00242128 | ||||
Corresponding_transcript | OVOC5319.1 | |||||
Corresponding_protein | OVP00220 | |||||
Matching_cDNA | AA294224 | Inferred_automatically | transcript_builder.pl | |||
AA934255 | Inferred_automatically | transcript_builder.pl | ||||
AI130622 | Inferred_automatically | transcript_builder.pl | ||||
AI444867 | Inferred_automatically | transcript_builder.pl | ||||
AI444888 | Inferred_automatically | transcript_builder.pl | ||||
AW682828 | Inferred_automatically | transcript_builder.pl | ||||
AW980220 | Inferred_automatically | transcript_builder.pl | ||||
BE239264 | Inferred_automatically | transcript_builder.pl | ||||
BE346041 | Inferred_automatically | transcript_builder.pl | ||||
BF154347 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG1440|c17_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 212.954 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 118.055 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
190.274 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
246.612 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
WBls:0000664 | 220.529 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
811.32 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |