Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: OVOC5080

expand all nodes | collapse all nodes | view schema

Name Class

OVOC5080SMapS_parentSequenceOVOC_OM2_53
StructureSource_exons1379
14131549
17711872
31613283
34233509
37303993
DB_infoDB_remarkOVO-UNC-30 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryMGM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00241889
Corresponding_transcriptOVOC5080.1
Corresponding_proteinOVP04860
Matching_cDNAovolvulus_GG1351|c107_g2_i4Inferred_automaticallytranscript_builder.pl
ovolvulus_GG1351|c107_g2_i5Inferred_automaticallytranscript_builder.pl
Brief_identificationHomeobox protein homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (13)
WBls:00001076.02506From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.88689From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
8.13651From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
9.79379From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006641.73906From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
3.04622From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated