WormBase Tree Display for CDS: OVOC3314
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OVOC3314 | Evidence | Curator_confirmed | WBPerson2062 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | OVOC_OM1b_133 | |||
Structure | Source_exons | 1 | 57 | |||
375 | 488 | |||||
604 | 728 | |||||
3240 | 3415 | |||||
4007 | 4104 | |||||
4654 | 4776 | |||||
5221 | 5312 | |||||
5612 | 5687 | |||||
DB_info | DB_remark | OVO-UNC-1 protein; contains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR001972 (Stomatin/HflK family), IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain), IPR028522 () | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00240123 | ||||
Corresponding_transcript | OVOC3314.1 | |||||
Corresponding_protein | OVP03744 | |||||
Matching_cDNA | AA934217 | Inferred_automatically | transcript_builder.pl | |||
AW208319 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG593|c13_g2_i1 | Inferred_automatically | transcript_builder.pl | ||||
ovolvulus_GG593|c13_g2_i5 | Inferred_automatically | transcript_builder.pl | ||||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 36.2001 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 10.6724 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | |||
22.8341 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
36.6251 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
WBls:0000664 | 17.0328 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
31.3979 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
Method | curated |