WormBase Tree Display for CDS: OVOC3226
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| OVOC3226 | SMap | S_parent | Sequence | OVOC_OM1b_125 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (19) | |||||
| DB_info | DB_remark | OVO-UNC-45 protein; contains similarity to Pfam domains PF07719 (Tetratricopeptide repeat), PF11701 (Myosin-binding striated muscle assembly central); contains similarity to Interpro domains IPR024660 (UNC-45/Cro1/She4, central domain), IPR019734 (Tetratricopeptide repeat), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR011989 (Armadillo-like helical), IPR013105 (Tetratricopeptide repeat 2), IPR016024 (Armadillo-type fold) | ||||
| Origin | From_laboratory | MGM | ||||
| Species | Onchocerca volvulus | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00240035 | ||||
| Corresponding_transcript | OVOC3226.1 | |||||
| Corresponding_protein | OVP08437 | |||||
| RNASeq_FPKM | WBls:0000104 (15) | |||||
| WBls:0000107 | 6.94304 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
| WBls:0000108 | 18.0453 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | |||
| 18.6583 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | ||||
| 8.59953 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
| WBls:0000664 | 15.8231 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | |||
| 17.0007 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | ||||
| Method | curated |
