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WormBase Tree Display for CDS: OVOC1896

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Name Class

OVOC1896EvidenceCurator_confirmedWBPerson2062
SMapS_parentSequenceOVOC_OM1b_81
StructureSource_exons1729
19242105
47274932
50645230
54255585
59516008
DB_infoDB_remarkOVO-LIM-4 protein; contains similarity to Pfam domains PF00046 (Homeodomain), PF00412 (LIM domain); contains similarity to Interpro domains IPR001781 (Zinc finger, LIM-type), IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryMBM
SpeciesOnchocerca volvulus
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00238705
Corresponding_transcriptOVOC1896.1
Corresponding_proteinOVP14096
Brief_identificationLIM/homeobox protein Awh homologPerson_evidenceWBPerson2973
RNASeq_FPKMWBls:0000104 (15)
WBls:00001071.23808From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.787249From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
3.25046From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.66655From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006643.13646From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
7.81264From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
Methodcurated