WormBase Tree Display for Sequence: L2_Nanopore_Roach_55630
expand all nodes | collapse all nodes | view schema
| L2_Nanopore_Roach_55630 | DNA | L2_Nanopore_Roach_55630 | 1431 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000027 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 2 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L2. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | Y17G9B.8 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | Y17G9B.8.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 2 entries comprising this consensus structure | ||||
| The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (50% : 1 of 2) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_IV_32 | |||
| BLAT_Nanopore:CHROMOSOME_V_54 | |||||
| BLAT_Nanopore:CHROMOSOME_I_11 | |||||
| BLAT_Nanopore:CHROMOSOME_I_21 | |||||
| BLAT_Nanopore:CHROMOSOME_I_76 | |||||
| BLAT_Nanopore:CHROMOSOME_I_90 | |||||
| BLAT_Nanopore:CHROMOSOME_I_99 | |||||
| BLAT_Nanopore:CHROMOSOME_III_56 | |||||
| BLAT_Nanopore:SRAE_chr1_62 | |||||
| Method | Nanopore |
