WormBase Tree Display for Sequence: L2_Nanopore_Roach_13791
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| L2_Nanopore_Roach_13791 | DNA | L2_Nanopore_Roach_13791 | 3247 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000027 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 3 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L2. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | ZK637.8d | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | ZK637.8d.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 3 entries comprising this consensus structure | ||||
| The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (66% : 2 of 3) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_III_60 | |||
| BLAT_Nanopore:CHROMOSOME_III_63 | |||||
| BLAT_Nanopore:OVOC_OM2_4 | |||||
| BLAT_Nanopore:OVOC_OM3 | |||||
| BLAT_Nanopore:SRAE_chr2_31 | |||||
| BLAT_Nanopore:SRAE_chr1_43 | |||||
| BLAT_Nanopore:SRAE_chrX_scaffold2_4 | |||||
| BLAT_Nanopore:SRAE_chrX_scaffold3_6 | |||||
| Method | Nanopore |
